{ "cells": [ { "cell_type": "markdown", "metadata": {}, "source": [ "# Part II: Academic Analyzer Framework" ] }, { "attachments": {}, "cell_type": "markdown", "metadata": {}, "source": [ "In [Part I]() of our tutorial, we explained how to load data from a variety of datasets into SFrame objects and MongoDB collections. While the SFrame objects make it easy to answer questions about how various academic trends change over time (see [Part III]() of the tutorial), it is still challenging to answer more complicated questions using these types of objects. For example, it would hard to calculate how many papers in Nature were written by a second author who is from the University of Washington, or how many papers have first authors who published in PLOS ONE in 2014.\n", "To answer these types of more complicated questions, we developed a code framework which provides easy object-oriented access to academic data stored in MongoDB. Our framework uses several basic object classes, such as Author, Paper, and AuthorCollection, that let us use Python code to answer complicated questions. In the following sections, we will explain each object class and give examples of how to use it." ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "## 1. The Paper Class" ] }, { "attachments": {}, "cell_type": "markdown", "metadata": {}, "source": [ "The Paper class is based on paper data from the MAG dataset and the AMinerMAG dataset (see tutorial Part I). The main idea behind this class is to make it easy to fetch data on a specific paper. Given a paper ID, it is possible to construct a paper object using the following code:" ] }, { "cell_type": "code", "execution_count": 1, "metadata": {}, "outputs": [ { "name": "stderr", "output_type": "stream", "text": [ "/home/michael/anaconda2/lib/python2.7/site-packages/h5py/__init__.py:36: FutureWarning: Conversion of the second argument of issubdtype from `float` to `np.floating` is deprecated. In future, it will be treated as `np.float64 == np.dtype(float).type`.\n", " from ._conv import register_converters as _register_converters\n", "2018-05-14 03:54:35,224 [MainThread ] [DEBUG] Fetching paper 75508021\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "Paper's id 75508021\n", "Paper's refrences count 8\n", "Paper's venue name Nature\n", "Paper's publication year 2007\n", "Paper's title 'Cell biology: The checkpoint brake relieved'\n", "Paper's keywords list [u'pharmacology', u'climate change', u'quantum physics', u'systems biology', u'astrophysics', u'cell division', u'immunology', u'cell biology', u'genomics', u'neurobiology', u'palaeobiology', u'ecology', u'evolution', u'molecular biology', u'environmental science', u'marine biology', u'structural biology', u'earth science', u'metabolomics', u'functional genomics', u'medicine', u'proteomics', u'biochemistry', u'cancer', u'cell cycle', u'dna', u'evolutionary biology', u'bioinformatics', u'biotechnology', u'drug discovery', u'developmental biology', u'transcriptomics', u'biology', u'computational biology', u'materials science', u'nature', u'genetics', u'geophysics', u'cell signalling', u'signal transduction', u'medical research', u'neuroscience', u'rna', u'astronomy', u'nanotechnology', u'physics']\n", "Paper's authors ids list - [u'83162F0D']\n" ] } ], "source": [ "from paper import *\n", "p = Paper('75508021')\n", "\n", "#We can easily get various basic paper attribute\n", "print \"Paper's id %s\" % p.paper_id\n", "print \"Paper's refrences count %s\" % p.references_count\n", "print \"Paper's venue name %s\" % p.venue_name\n", "print \"Paper's publication year %s\" % p.publish_year\n", "print \"Paper's title '%s'\" % p.title\n", "print \"Paper's keywords list %s\" % p.keywords_list \n", "print \"Paper's authors ids list - %s\" % p.author_ids_list # we can also get list of author objects using p.authors_list" ] }, { "attachments": {}, "cell_type": "markdown", "metadata": {}, "source": [ "We can also get more complicated paper features." ] }, { "cell_type": "code", "execution_count": 2, "metadata": {}, "outputs": [ { "name": "stderr", "output_type": "stream", "text": [ "2018-05-14 03:54:52,672 [MainThread ] [DEBUG] Fetching author 83162F0D\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "Did the paper's last author publised in the venue before? Answer: True\n", "Paper's total citations in 2015 1.0\n", "Paper's max citation number in a specific year 2.0\n", "The number of times paper's authors published in the paper's venue in the past - 2\n" ] } ], "source": [ "print \"Did the paper's last author publised in the venue before? Answer: %s\" % p.did_last_author_publish_in_venue() \n", "print \"Paper's total citations in 2015 %s\" % p.get_total_citations_number_in_year(2015)\n", "print \"Paper's max citation number in a specific year %s\" % p.get_max_citations_number_in_year()\n", "print \"The number of times paper's authors published in the paper's venue in the past - %s\" % p.total_number_of_times_authors_published_in_venue" ] }, { "attachments": {}, "cell_type": "markdown", "metadata": {}, "source": [ "If the paper is in the AMinerMAG dataset, additional features are available, such as the paper's abstract and ISSN." ] }, { "cell_type": "code", "execution_count": 3, "metadata": {}, "outputs": [ { "name": "stderr", "output_type": "stream", "text": [ "2018-05-14 03:54:56,049 [MainThread ] [DEBUG] Fetching paper 778DE072\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "Paper's abstract: \n", "\n", " In spite of various cytogenetic works on suborder Heteroptera, the chromosome organization, function and its evolution in this group is far from being fully understood. Cytologically, the family Rhyparochromidae constitutes a heterogeneous group differing in chromosome numbers. This family possesses XY sex mechanism in the majority of the species with few exceptions. In the present work, multiple banding techniques viz., C-banding, base-specific fluorochromes (DAPI/CMA3) and silver nitrate staining have been used to cytologically characterize the chromosomes of the seed plant pest Elasmolomus (Aphanus) sordidus Fabricius, 1787 having 2n=12=8A+2m+XY. One pair of the autosomes was large while three others were of almost equal size. At diplotene, C-banding technique revealed, that three autosomal bivalents show terminal constitutive heterochromatic bands while one medium sized bivalent was euchromatic. Microchromosomes (m-chromosomes) were positively heteropycnotic. After DAPI and CMA3 staining, all the autosomal bivalents showed equal fluorescence, except CMA3 positive signals, observed at both telomeric heterochromatic regions of one medium sized autosomal bivalent. Silver nitrate staining further revealed that this chromosome pair carries Nucleolar Organizer Regions (NORs) at the location of CMA3 positive signals. The X chromosome showed a thick C-band, positive to both DAPI /CMA3 while Y, otherwise C-negative, was weakly positive to DAPI and negative to CMA3, m-chromosomes were DAPI bright and CMA3 dull.\n", "Paper's ISSN 1313-2989\n" ] } ], "source": [ "p = Paper('778DE072')\n", "print \"Paper's abstract: \\n\\n %s\" % p.abstract\n", "print \"Paper's ISSN %s\" % p.issn" ] }, { "attachments": {}, "cell_type": "markdown", "metadata": {}, "source": [ "The Paper class contains many functions that can be used to extract additional data on each paper. Moreover, the full paper's object data can be accessed using the following line:" ] }, { "cell_type": "code", "execution_count": 4, "metadata": {}, "outputs": [ { "data": { "text/plain": [ "{u'Aminer Paper ID': u'55a5ce0d65ce60f99bf5c02d',\n", " u'Authors List Sorted': [u'7FDB7566', u'80418DAE'],\n", " u'Authors Number': 2,\n", " u'Conference ID mapped to venue name': u'',\n", " u'Field of study list': [u'0660586C', u'039D5C06'],\n", " u'Field of study list names': [None, u'Bioinformatics'],\n", " u'Fields of study parent list (L0)': [],\n", " u'Fields of study parent list (L1)': [u'039D5C06'],\n", " u'Fields of study parent list (L2)': [],\n", " u'Fields of study parent list names (L0)': [],\n", " u'Fields of study parent list names (L1)': [u'Bioinformatics'],\n", " u'Fields of study parent list names (L2)': [],\n", " u'Journal ID mapped to venue name': u'0BDFC074',\n", " u'Keywords List': [u'biomedical research', u'bioinformatics'],\n", " u'MAG Paper ID': u'778DE072',\n", " u'Normalized paper title': u'first report on c banding fluorochrome staining and nor location in holocentric chromosomes of elasmolomus aphanus sordidus fabricius 1787 heteroptera rhyparochromidae',\n", " u'Normalized venue name': u'zookeys',\n", " u'Original paper title': u'First report on C-banding, fluorochrome staining and NOR location in holocentric chromosomes of Elasmolomus (Aphanus) sordidus Fabricius, 1787 (Heteroptera, Rhyparochromidae).',\n", " u'Original venue name': u'ZooKeys',\n", " u'Paper Document Object Identifier (DOI)': u'10.3897/zookeys.319.4265',\n", " u'Paper publish date': u'2013/07/30',\n", " u'Paper publish year': 2013,\n", " u'Paper rank': 19485,\n", " u'Ref Number': 15,\n", " u'Total Citations by Year': {u'2014': 1.0, u'2015': 1.0},\n", " u'Total Citations by Year without Self Citations': {u'2014': 1.0,\n", " u'2015': 1.0},\n", " u'Urls': [u'/pmc/articles/PMC3764527/?report=abstract',\n", " u'http://europepmc.org/articles/PMC3764527?pdf=render',\n", " u'http://europepmc.org/abstract/MED/24039525',\n", " u'http://europepmc.org/articles/PMC3764527',\n", " u'http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3764527/',\n", " u'http://www.researchgate.net/publication/256613915_First_report_on_C-banding_fluorochrome_staining_and_NOR_location_in_holocentric_chromosomes_of_Elasmolomus_(Aphanus)_sordidus_Fabricius_1787_(Heteroptera_Rhyparochromidae)',\n", " u'http://www.pensoft.net/J_FILES/1/articles/4265/4265-G-1-layout.html',\n", " u'http://zookeys.pensoft.net/articles.php?id=3432',\n", " u'http://zookeys.pensoft.net/lib/ajax_srv/generate_pdf.php?readonly_preview=1&document_id=3432',\n", " u'http://zookeys.pensoft.net/lib/ajax_srv/article_elements_srv.php?action=download_pdf&item_id=3432',\n", " u'https://www.researchgate.net/publication/256613915_First_report_on_C-banding_fluorochrome_staining_and_NOR_location_in_holocentric_chromosomes_of_Elasmolomus_Aphanus_sordidus_Fabricius_1787_Heteroptera_Rhyparochromidae'],\n", " u'_id': ObjectId('5ae549ce2064f817bf6661e2'),\n", " u'abstract': u'In spite of various cytogenetic works on suborder Heteroptera, the chromosome organization, function and its evolution in this group is far from being fully understood. Cytologically, the family Rhyparochromidae constitutes a heterogeneous group differing in chromosome numbers. This family possesses XY sex mechanism in the majority of the species with few exceptions. In the present work, multiple banding techniques viz., C-banding, base-specific fluorochromes (DAPI/CMA3) and silver nitrate staining have been used to cytologically characterize the chromosomes of the seed plant pest Elasmolomus (Aphanus) sordidus Fabricius, 1787 having 2n=12=8A+2m+XY. One pair of the autosomes was large while three others were of almost equal size. At diplotene, C-banding technique revealed, that three autosomal bivalents show terminal constitutive heterochromatic bands while one medium sized bivalent was euchromatic. Microchromosomes (m-chromosomes) were positively heteropycnotic. After DAPI and CMA3 staining, all the autosomal bivalents showed equal fluorescence, except CMA3 positive signals, observed at both telomeric heterochromatic regions of one medium sized autosomal bivalent. Silver nitrate staining further revealed that this chromosome pair carries Nucleolar Organizer Regions (NORs) at the location of CMA3 positive signals. The X chromosome showed a thick C-band, positive to both DAPI /CMA3 while Y, otherwise C-negative, was weakly positive to DAPI and negative to CMA3, m-chromosomes were DAPI bright and CMA3 dull.',\n", " u'authors': [{u'name': u'Suman Vikas',\n", " u'org': u'Department of Entomology, Y.S. Parmar University of Horticulture and Forestry, Nauni, Solan 173 230, Himachal Pradesh, India.'},\n", " {u'name': u'Kaur Harbhajan'}],\n", " u'isbn': None,\n", " u'issn': u'1313-2989',\n", " u'issue': u'319',\n", " u'keywords': [u'c-banding',\n", " u'cma3',\n", " u'dapi',\n", " u'nor location',\n", " u'bioinformatics',\n", " u'biomedical research'],\n", " u'lang': u'en',\n", " u'n_citation': None,\n", " u'page_end': u'291',\n", " u'page_start': u'283',\n", " u'pdf': None,\n", " u'references': [u'56d8b9c0dabfae2eee2562bf',\n", " u'53e9b699b7602d970420b40f',\n", " u'53e9b587b7602d97040c9585',\n", " u'56d8af4edabfae2eeed4f406',\n", " u'55a39b65612ca6486872d775',\n", " u'56d9268bdabfae2eeebe84a7',\n", " u'55a5f18665cead59c830b93c',\n", " u'56d82eb3dabfae2eee143b0c',\n", " u'55a3adfcc91b587b095ef40c',\n", " u'56d9268bdabfae2eeebe841f',\n", " u'56d85f37dabfae2eee6ed3ee',\n", " u'55a4a3bb612ca648689e7e89',\n", " u'56d82e27dabfae2eee10e2dc',\n", " u'56d8e059dabfae2eee0defb3'],\n", " u'title': u'First report on C-banding, fluorochrome staining and NOR location in holocentric chromosomes of Elasmolomus (Aphanus) sordidus Fabricius, 1787 (Heteroptera, Rhyparochromidae).',\n", " u'url': [u'http://dx.doi.org/10.3897/zookeys.319.4265',\n", " u'http://www.ncbi.nlm.nih.gov/pubmed/24039525?report=xml&format=text'],\n", " u'venue': u'ZooKeys',\n", " u'volume': None,\n", " u'year': 2013}" ] }, "execution_count": 4, "metadata": {}, "output_type": "execute_result" } ], "source": [ "p._json_data" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "More details on the Paper class can be found at [paper.py]() " ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "# 2. The Author Class" ] }, { "attachments": {}, "cell_type": "markdown", "metadata": {}, "source": [ "The Author class is based on author data from the MAG dataset (see tutorial Part I). The dataset contains data based on over 22 million authors. The main idea behind this class is to make it easy to fetch data on a specific author using the author's author id. To obtain an author's *author id* we can use the following code:" ] }, { "cell_type": "code", "execution_count": 5, "metadata": {}, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ "Matching Authors ids [u'79762927']\n", "Matching Authors ids [u'7FD415E0', u'82479236', u'85145FD9', u'7DB99A96', u'7DB0F51C', u'7EEB86E0', u'7F309657', u'7FBB9CFB', u'29542192', u'849D27DC']\n" ] } ], "source": [ "from author import Author\n", "import re\n", "\n", "l = Author.find_authors_id_by_name('tim bernerslee')\n", "print \"Matching Authors ids %s\" % l\n", "\n", "#we can also us e regex to find matching authors ids\n", "r = re.compile(\"Tim\\s+B.*\", re.IGNORECASE)\n", "l = Author.find_authors_id_by_name(r)\n", "print \"Matching Authors ids %s\" %l[:10]" ] }, { "attachments": {}, "cell_type": "markdown", "metadata": {}, "source": [ "Given an Author ID, it is possible to construct an Author object using the following code:" ] }, { "cell_type": "code", "execution_count": 6, "metadata": {}, "outputs": [ { "name": "stderr", "output_type": "stream", "text": [ "2018-05-14 03:55:25,168 [MainThread ] [DEBUG] Fetching author 79762927\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "Author's full name: tim bernerslee\n", "Author's papers number: 20\n", "Author's journals list between 2000-2010: [u'062B05D6', u'038E80CE', u'09B77941', u'0ACD8486', u'0BB0DA67', u'0BB0DA67', u'046515A4', u'06CF2E55']\n", "Author's predict gender and name's male probability: Male (0.997655237422)\n", "Author's last publication year in the dataset: 2012\n" ] } ], "source": [ "a = Author(u'79762927')\n", "print \"Author's full name: %s\" % a.fullname\n", "print \"Author's papers number: %s\" % a.papers_number\n", "print \"Author's journals list between 2000-2010: %s\" % a.get_venues_list(VenueType.journal, start_year=2000, end_year=2010)\n", "print \"Author's predict gender and name's male probability: %s (%s)\" % (a.gender, a.male_probability) # predicting the author gender based on his/her first name\n", "print \"Author's last publication year in the dataset: %s\" % a.last_publication_year" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "We can use the code to find more complex insights for example who is the author's most common coauthor:" ] }, { "cell_type": "code", "execution_count": 7, "metadata": {}, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ "Author's number of coauthors 90\n", "Author's most common coauthor's ID - 0E390AA0 (number of joint papers 7)\n" ] } ], "source": [ "from collections import Counter\n", "coauthors = a.get_coauthors_list(start_year=None, end_year=None)\n", "print \"Author's number of coauthors %s\" % len(coauthors)\n", "c = Counter(coauthors)\n", "print \"Author's most common coauthor's ID - %s (number of joint papers %s)\" % c.most_common(1)[0]" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "The author's object data can be accessed using the following line:" ] }, { "cell_type": "code", "execution_count": 8, "metadata": {}, "outputs": [ { "data": { "text/plain": [ "{u'Affilation by Year Dict': {2006: [u'massachusetts institute of technology',\n", " u'massachusetts institute of technology',\n", " u'massachusetts institute of technology',\n", " u'massachusetts institute of technology'],\n", " 2007: [u'massachusetts institute of technology'],\n", " 2008: [u'massachusetts institute of technology',\n", " u'massachusetts institute of technology',\n", " u'massachusetts institute of technology',\n", " u'university of southampton'],\n", " 2009: [u'massachusetts institute of technology',\n", " u'massachusetts institute of technology',\n", " u'massachusetts institute of technology'],\n", " 2010: [u'massachusetts institute of technology',\n", " u'massachusetts institute of technology',\n", " u'international association of machinists and aerospace workers']},\n", " u'Author ID': u'79762927',\n", " u'Author name': u'tim bernerslee',\n", " u'Coauthors by Years Dict': {2006: [u'8153503E',\n", " u'7628BD51',\n", " u'7628BD51',\n", " u'76C81530',\n", " u'8153503E',\n", " u'78E7DA33',\n", " u'7918DADD',\n", " u'813BFDF7',\n", " u'0E390AA0',\n", " u'78E7DA33',\n", " u'0E1E327C',\n", " u'7BAA4A2F',\n", " u'85466A30',\n", " u'85466A30',\n", " u'85466A30',\n", " u'0E390AA0',\n", " u'0E390AA0',\n", " u'19931D56',\n", " u'76BC859C',\n", " u'83E59827',\n", " u'7A1FEB48',\n", " u'7D71F4B6',\n", " u'80CB2B62',\n", " u'4D8BA28E',\n", " u'19931D56',\n", " u'19931D56',\n", " u'19931D56',\n", " u'80B4A38E'],\n", " 2007: [u'7E5C9B91',\n", " u'76BC859C',\n", " u'5D6F8B09',\n", " u'18056665',\n", " u'7B1EE4CE',\n", " u'0E390AA0',\n", " u'7BAA4A2F',\n", " u'8635F2AD',\n", " u'19931D56'],\n", " 2008: [u'7E18BE47',\n", " u'7628BD51',\n", " u'7B1EE4CE',\n", " u'7E5C9B91',\n", " u'76BC859C',\n", " u'78E7DA33',\n", " u'78E7DA33',\n", " u'85466A30',\n", " u'79124900',\n", " u'0E390AA0',\n", " u'0E390AA0',\n", " u'19931D56'],\n", " 2009: [u'84D4AC28',\n", " u'82E93258',\n", " u'7EDC9E57',\n", " u'79B8ED2E',\n", " u'0EBE528E',\n", " u'7CF754AE',\n", " u'7F1CB5D0',\n", " u'7E9E7340',\n", " u'036D501B',\n", " u'456CD085',\n", " u'0E4BE3F3',\n", " u'0C833833',\n", " u'2873C9C0',\n", " u'27DC87D1',\n", " u'02D2C557',\n", " u'807F3031',\n", " u'7B1EE4CE',\n", " u'0E390AA0',\n", " u'19931D56',\n", " u'01C84A39',\n", " u'760D21FE',\n", " u'13C11734'],\n", " 2010: [u'78E7DA33',\n", " u'78E7DA33',\n", " u'77E10B49',\n", " u'721704E3',\n", " u'7D11AF84',\n", " u'7628BD51',\n", " u'7F221475',\n", " u'82E93258',\n", " u'77DA315B',\n", " u'8153503E',\n", " u'283129A4',\n", " u'0BA20C62'],\n", " 2012: [u'456CD085',\n", " u'7F025FA1',\n", " u'7628BD51',\n", " u'8153503E',\n", " u'08EA318A',\n", " u'5D6F8B09',\n", " u'6790DF28']},\n", " u'Conference ID by Year Dict': {2006: [u'46A05BB0'],\n", " 2009: [u'44E12FD1', u'4558D729'],\n", " 2010: [u'44E12FD1']},\n", " u'First name': u'tim',\n", " u'Gender Dict': {u'Gender': u'Male',\n", " u'Percentage Males': 0.9976552374219394,\n", " u'Total Births': 84870,\n", " u'Total Males': 84671},\n", " u'Journal ID by Year Dict': {2006: [u'046515A4', u'06CF2E55'],\n", " 2008: [u'062B05D6', u'038E80CE', u'09B77941'],\n", " 2009: [u'0ACD8486'],\n", " 2010: [u'0BB0DA67', u'0BB0DA67']},\n", " u'Last name': u'bernerslee',\n", " u'Papers by Years Dict': {2006: [u'800F70F4',\n", " u'7E22A795',\n", " u'627243A2',\n", " u'0B340A09',\n", " u'69094209',\n", " u'80ED6199'],\n", " 2007: [u'77AA1DDA', u'5B3F9EC1'],\n", " 2008: [u'75A42130', u'762EF5EE', u'7FF2B178', u'7EB0A7DF'],\n", " 2009: [u'5EA67E7B', u'781D60AA', u'815E4846', u'7E4620BC'],\n", " 2010: [u'858CCF29', u'771F58EB', u'8075C5EC'],\n", " 2012: [u'0363BC68']},\n", " u'Sequence Number by Year Dict': {2006: [u'2', u'1', u'1', u'2', u'3', u'3'],\n", " 2007: [u'3', u'1'],\n", " 2008: [u'4', u'1', u'1', u'1'],\n", " 2009: [u'3', u'3', u'5', u'1'],\n", " 2010: [u'2', u'2', u'7'],\n", " 2012: [u'6']},\n", " u'Venue by Year Dict': {2006: [u'Foundations and Trends in Web Science',\n", " u'national conference on artificial intelligence',\n", " u'IEEE Intelligent Systems'],\n", " 2008: [u'Communications of The ACM',\n", " u'Theory and Practice of Logic Programming',\n", " u'Ai Magazine'],\n", " 2009: [u'international semantic web conference',\n", " u'International Journal on Semantic Web and Information Systems',\n", " u'human factors in computing systems'],\n", " 2010: [u'Artificial Intelligence',\n", " u'Artificial Intelligence',\n", " u'international semantic web conference']},\n", " u'_id': ObjectId('5ae761062064f8d9e972574d')}" ] }, "execution_count": 8, "metadata": {}, "output_type": "execute_result" } ], "source": [ "a._json_data" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "More details on the Author class can be found at [author.py]() " ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "# 3. The Papers Collection Class" ] }, { "attachments": {}, "cell_type": "markdown", "metadata": {}, "source": [ "The goal of the Papers Collection class is to make it easy to analyze a list of paper objects. The class makes it possible to easily filter papers which were published in a specific year, and to obtain various insights regarding the papers and their authors. For example, let's select papers that were published in Nature journal and are part of the AMinerMAG dataset." ] }, { "cell_type": "code", "execution_count": 9, "metadata": {}, "outputs": [], "source": [ "from configs import *\n", "sf = tc.load_sframe(EXTENDED_PAPERS_SFRAME)\n", "sf = sf[sf['Original venue name'] == 'Nature'] # Another option to get paper ids is to use PAPERS_FETCHER.get_papers_ids_by_issn(issn) \n", "sf = sf[sf['Ref Number'] >= 5]\n", "sf.materialize()\n", "paper_ids = list(sf['Paper ID'])" ] }, { "attachments": {}, "cell_type": "markdown", "metadata": {}, "source": [ "Now let's define a papers collection object which contains all these papers:" ] }, { "cell_type": "code", "execution_count": 10, "metadata": {}, "outputs": [ { "name": "stderr", "output_type": "stream", "text": [ "2018-05-14 04:20:01,819 [MainThread ] [DEBUG] Fetching paper 75CA889C\n", "2018-05-14 04:20:01,827 [MainThread ] [DEBUG] Fetching paper 761F4E45\n", "2018-05-14 04:20:01,832 [MainThread ] 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7BB072EC\n", "2018-05-14 04:21:42,768 [MainThread ] [DEBUG] Fetching paper 7CA8E4C6\n", "2018-05-14 04:21:42,771 [MainThread ] [DEBUG] Fetching paper 7B955D21\n", "2018-05-14 04:21:42,774 [MainThread ] [DEBUG] Fetching paper 7CD15F01\n", "2018-05-14 04:21:42,776 [MainThread ] [DEBUG] Fetching paper 7BD9B24C\n", "2018-05-14 04:21:42,780 [MainThread ] [DEBUG] Fetching paper 63F633E1\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "Number of retrevied paper ids with at least 5 refs- 32536\n" ] } ], "source": [ "from papers_collection_analyer import *\n", "pc = PapersCollection(paper_ids) # this is a lazy object\n", "#Create a list of papers object\n", "print \"Number of retrieved paper ids with at least 5 refs- %s\" % len(pc.papers_list) " ] }, { "attachments": {}, "cell_type": "markdown", "metadata": {}, "source": [ "Now we can use the papers collection object to gain various insights regarding the papers in the collection." ] }, { "cell_type": "code", "execution_count": 11, "metadata": {}, "outputs": [ { "name": "stderr", "output_type": "stream", "text": [ "2018-05-14 04:24:09,424 [MainThread ] [DEBUG] Fetching author 7F182519\n", "2018-05-14 04:24:09,431 [MainThread ] [DEBUG] Fetching author 2761E14D\n", "2018-05-14 04:24:09,433 [MainThread ] [DEBUG] Fetching author 7D63AB2B\n", "2018-05-14 04:24:09,435 [MainThread ] [DEBUG] Fetching author 7FBF5B13\n", "2018-05-14 04:24:09,438 [MainThread ] [DEBUG] Fetching author 827671A3\n", "2018-05-14 04:24:09,441 [MainThread ] [DEBUG] Fetching author 825EC656\n", "2018-05-14 04:24:09,444 [MainThread ] [DEBUG] Fetching author 7524B017\n", "2018-05-14 04:24:09,446 [MainThread ] [DEBUG] Fetching author 854BF47B\n", "2018-05-14 04:24:09,448 [MainThread ] [DEBUG] Fetching author 8077B97A\n", "2018-05-14 04:24:09,451 [MainThread ] [DEBUG] Fetching author 8140D565\n", "2018-05-14 04:24:09,453 [MainThread ] [DEBUG] Fetching author 7687744E\n", "2018-05-14 04:24:09,456 [MainThread ] [DEBUG] Fetching author 7BA06B09\n", 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author 7FAF713F\n", "2018-05-14 04:24:16,886 [MainThread ] [DEBUG] Fetching author 764EFAC7\n", "2018-05-14 04:24:16,888 [MainThread ] [DEBUG] Fetching author 7A9690AF\n", "2018-05-14 04:24:16,892 [MainThread ] [DEBUG] Fetching author 765AB93B\n", "2018-05-14 04:24:16,894 [MainThread ] [DEBUG] Fetching author 7F822D00\n", "2018-05-14 04:24:16,897 [MainThread ] [DEBUG] Fetching author 811B80F9\n", "2018-05-14 04:24:16,899 [MainThread ] [DEBUG] Fetching author 7706154D\n", "2018-05-14 04:24:16,902 [MainThread ] [DEBUG] Fetching author 7CA9B9A0\n", "2018-05-14 04:24:16,905 [MainThread ] [DEBUG] Fetching author 730AE6E8\n", "2018-05-14 04:24:16,907 [MainThread ] [DEBUG] Fetching author 8079A605\n", "2018-05-14 04:24:16,910 [MainThread ] [DEBUG] Fetching author 7E9EEDBB\n", "2018-05-14 04:24:16,913 [MainThread ] [DEBUG] Fetching author 0714880B\n", "2018-05-14 04:24:16,916 [MainThread ] [DEBUG] Fetching author 2B9D3262\n", "2018-05-14 04:24:16,918 [MainThread ] [DEBUG] Fetching author 76FFD809\n", "2018-05-14 04:24:16,921 [MainThread ] [DEBUG] Fetching author 816D322D\n", "2018-05-14 04:24:16,924 [MainThread ] [DEBUG] Fetching author 75336A4D\n", "2018-05-14 04:24:16,926 [MainThread ] [DEBUG] Fetching author 29AC6537\n", "2018-05-14 04:24:16,929 [MainThread ] [DEBUG] Fetching author 74039347\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "Last Authors Median Academic Age in 2010 - 18.449626865671643\n" ] } ], "source": [ "print \"Min publication year %s\" % pc.min_publication_year\n", "print \"Max publication year %s\" % pc.max_publication_year\n", "print \"Last Authors Median Academic Age in 2000 - %s\" % pc.last_authors_median_age(2000)\n", "print \"Last Authors Median Academic Age in 2010 - %s\" % pc.last_authors_median_age(2010)" ] }, { "attachments": {}, "cell_type": "markdown", "metadata": {}, "source": [ "Let's calculate what is the most-cited paper in the collection:" ] }, { "cell_type": "code", "execution_count": 12, "metadata": {}, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ "Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4 118108.0\n" ] } ], "source": [ "p = pc.max_citations_paper(2015, include_self_citations=True)\n", "print p.title, p.total_citations_number_by_year(2015, include_self_citation=True)" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "Let's calculate the median citation number for papers that were published in 2000 after 5 years:" ] }, { "cell_type": "code", "execution_count": 13, "metadata": {}, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ "Median citation number for papers that were published in 2000 after 5 years - 77.0\n" ] } ], "source": [ "print \"Median citation number for papers that were published in 2000 after 5 years - %s\" % pc.papers_median_citations_after_years(2009, 5, True)" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "We can also get the papers’ top keywords in various years:" ] }, { "cell_type": "code", "execution_count": 14, "metadata": {}, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ "Top 10-keywords in 1950 {u'amino acid': 22, u'genetics': 50, u'biochemistry': 20, u'nucleotide sequence': 20, u'enzyme': 40, u'molecular weight': 25, u'central nervous system': 19, u'dopamine': 18, u'escherichia coli': 20, u'dna sequence': 24}\n", "Top 10-keywords in 2015 {u'genetics': 13, u'cell biology': 13, u'cancer': 15, u'nature': 235, u'rna': 12, u'immunology': 11, u'geochemistry': 15, u'x ray crystallography': 37, u'palaeontology': 16, u'neuroscience': 13}\n" ] } ], "source": [ "print \"Top 10-keywords in 1950 %s\" % pc.top_keywords(1980, top_keywords_number=10)\n", "print \"Top 10-keywords in 2015 %s\" % pc.top_keywords(2015, top_keywords_number=10)" ] }, { "attachments": {}, "cell_type": "markdown", "metadata": {}, "source": [ "The Papers Collection class provides wide functionality to obtain insights about the papers that easily can be extended. More details on the Papers Collection class can be found in papers_collections_analyzer.py" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "# 4. The Authors Collection Class" ] }, { "attachments": {}, "cell_type": "markdown", "metadata": {}, "source": [ "The goal of the Authors Collection class is to provide an easy way to analyze a variety of features of list of Author objects, such as age and gender statistics. Let's, for example, take all the authors that published in Nature in 2010:" ] }, { "cell_type": "code", "execution_count": 15, "metadata": {}, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ "Authors average academic age in 2010 - 12.468946188340807\n", "Authors average number of publications between 2005 and 2010 - 19.47690582959641\n", "Authors Gender stats - Counter({u'Male': 4339, u'Unisex': 1954, u'Female': 1611, None: 1016})\n" ] } ], "source": [ "from authors_list_analyzer import AuthorsListAnalyzer\n", "authors_list = pc.all_authors_in_year_list(2010) # We can also consturct the \n", "ac = AuthorsListAnalyzer(authors_list)\n", "print \"Authors average academic age in 2010 - %s\" % ac.get_average_age(2010)\n", "print 'Authors average number of publications between 2005 and 2010 - %s' % ac.get_average_publication_number(2005,2010)\n", "print \"Authors Gender stats - %s\" % ac.get_gender_stats()" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "# 5. The Venue Class" ] }, { "attachments": {}, "cell_type": "markdown", "metadata": {}, "source": [ "The Venue class is an extension of the Papers Collection class, and it supports all the Papers Collection class functionality. Moreover, the main goal of the Venue class is to easily analyze venues (especially journals) and to help to understand how various venue's features change over time. The class can be constructed using MAG's venue ID, venue name, ISSN list, or a list of MAG paper IDs. For example, if we want to analyze Science journal, we can use the following line:" ] }, { "cell_type": "code", "execution_count": 19, "metadata": {}, "outputs": [ { "name": "stderr", "output_type": "stream", "text": [ "2018-05-14 05:05:52,575 [MainThread ] [INFO ] Consturcting a Venue object with the following params venue_id=None, venue_name=Science, issn_list=() \n", "2018-05-14 05:05:52,581 [MainThread ] [INFO ] Get SJR data of venue_name=Science, issn_list=()\n", "2018-05-14 05:05:52,587 [MainThread ] [INFO ] Consturcted a Venue object with 212305 papers\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "Total paper 212305\n", "Top 10-keywords in 1950 {u'organic chemistry': 6, u'elementary particles': 6, u'genetics': 14, u'social science': 6, u'genes': 7, u'microbiology': 9, u'social change': 7, u'enzyme': 17, u'amino acid': 6, u'mutants': 6}\n", "Top 10-keywords in 2015 {u'membrane protein': 5, u'human factors': 5, u'bioinformatics': 5, u'injury prevention': 5, u'biomedical research': 5, u'ergonomics': 5, u'biological sciences': 6, u'physical sciences': 7, u'suicide prevention': 5, u'occupational safety': 5}\n" ] } ], "source": [ "from venue import *\n", "# this will search and load all the MAG papers from Science \n", "v = Venue(venue_name=\"Science\")\n", "# Total papers: 212,305 papers\n", "print \"Total paper %s\" % len(v.papers_list)\n", "print \"Top 10-keywords in 1950 %s\" % v.top_keywords(1960, top_keywords_number=10)\n", "print \"Top 10-keywords in 2015 %s\" % v.top_keywords(2015, top_keywords_number=10)\\" ] }, { "attachments": {}, "cell_type": "markdown", "metadata": {}, "source": [ "In this study, we mainly focus on papers with at least 5 references. Therefore, we will use the *papers_filter_func* to filter out the papers without 5 references." ] }, { "cell_type": "code", "execution_count": 25, "metadata": {}, "outputs": [ { "name": "stderr", "output_type": "stream", "text": [ "2018-05-14 05:07:31,418 [MainThread ] [INFO ] Consturcting a Venue object with the following params venue_id=None, venue_name=Science, issn_list=() \n", "2018-05-14 05:07:36,604 [MainThread ] [INFO ] Get SJR data of venue_name=Science, issn_list=()\n", "2018-05-14 05:07:36,607 [MainThread ] [INFO ] Consturcted a Venue object with 212305 papers\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "Median number of citations after five years for papers publish in 2000 - 93.0\n", "Papers' average length in 2015 - 4.027027027027027\n", "Last authors average age in 2014 - 19.81500872600349' \n" ] } ], "source": [ "v = Venue(venue_name=\"Science\", papers_filter_func=lambda p:p.references_count < 5)\n", "print \"Median number of citations after five years for papers published in 2000 - %s\" % v.papers_median_citations_after_years(2000, 5, True)\n", "print \"Papers' average length in 2015 - %s\" % v.papers_average_length(2015)[0]\n", "print \"Last authors average age in 2014 - %s' \" % v.last_authors_average_age(2014)\n" ] }, { "attachments": {}, "cell_type": "markdown", "metadata": {}, "source": [ "It is also possible to construct a venue object using a list of papers IDs. The VenueFetcher class (in venue_fetcher.py) contains a function that provides an easy way to get all papers IDs for various journals:" ] }, { "cell_type": "code", "execution_count": 26, "metadata": {}, "outputs": [ { "data": { "text/html": [ "
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Journal ID mapped to
venue name ...		CountJournal namePaper IDs List
0143CDDC1041studies in history and
philosophy of science ...		[757EC648, 768D63B9,
774104E4, 7691EF0A, ...
0970A6F53907international
immunopharmacology ...		[7722D02E, 75BAFE6A,
75F4E11E, 7E4F7951, ...
04EAD463177international journal of
rheumatology ...		[5B57FF96, 63DE6A9E,
80C97B52, 77163112, ...
0650CB25164informal logic[7DF2C40E, 7FABBBF2,
5E733FCB, 604681B7, ...
0A976928185irish veterinary journal[7D954D12, 779BB59F,
8152A4BF, 7BEF9B7B, ...
0AA5FF5A411frontiers in
neuroendocrinology ...		[75567664, 7823E030,
77E5C2AC, 754D4816, ...
09C674F86906acs applied materials &
interfaces ...		[75ACBB73, 772F0B15,
7771BD64, 7E17C60B, ...
044AB264122bulletin of the american
museum of natural his ...		[7DE92DE1, 7A41CED8,
7C1FC428, 7B468860, ...
038BDE8E536oceanology[77F1B853, 7D6DFE13,
76A71664, 78C77D6D, ...
0655038B11681cancer letters[77F08DEE, 759AD03E,
7DF1C344, 767EF695, ...
\n", "[8547 rows x 4 columns]
Note: Only the head of the SFrame is printed.
You can use print_rows(num_rows=m, num_columns=n) to print more rows and columns.\n", "
" ], "text/plain": [ "Columns:\n", "\tJournal ID mapped to venue name\tstr\n", "\tCount\tint\n", "\tJournal name\tstr\n", "\tPaper IDs List\tlist\n", "\n", "Rows: 8547\n", "\n", "Data:\n", "+-------------------------------+-------+-------------------------------+\n", "| Journal ID mapped to venue... | Count | Journal name |\n", "+-------------------------------+-------+-------------------------------+\n", "| 0143CDDC | 1041 | studies in history and phi... |\n", "| 0970A6F5 | 3907 | international immunopharma... |\n", "| 04EAD463 | 177 | international journal of r... |\n", "| 0650CB25 | 164 | informal logic |\n", "| 0A976928 | 185 | irish veterinary journal |\n", "| 0AA5FF5A | 411 | frontiers in neuroendocrin... |\n", "| 09C674F8 | 6906 | acs applied materials & in... |\n", "| 044AB264 | 122 | bulletin of the american m... |\n", "| 038BDE8E | 536 | oceanology |\n", "| 0655038B | 11681 | cancer letters |\n", "+-------------------------------+-------+-------------------------------+\n", "+-------------------------------+\n", "| Paper IDs List |\n", "+-------------------------------+\n", "| [757EC648, 768D63B9, 77410... |\n", "| [7722D02E, 75BAFE6A, 75F4E... |\n", "| [5B57FF96, 63DE6A9E, 80C97... |\n", "| [7DF2C40E, 7FABBBF2, 5E733... |\n", "| [7D954D12, 779BB59F, 8152A... |\n", "| [75567664, 7823E030, 77E5C... |\n", "| [75ACBB73, 772F0B15, 7771B... |\n", "| [7DE92DE1, 7A41CED8, 7C1FC... |\n", "| [77F1B853, 7D6DFE13, 76A71... |\n", "| [77F08DEE, 759AD03E, 7DF1C... |\n", "+-------------------------------+\n", "[8547 rows x 4 columns]\n", "Note: Only the head of the SFrame is printed.\n", "You can use print_rows(num_rows=m, num_columns=n) to print more rows and columns." ] }, "execution_count": 26, "metadata": {}, "output_type": "execute_result" } ], "source": [ "VENUE_FETCHER.get_valid_venues_papers_ids_sframe(min_ref_number=5, min_journal_papers_num=100)" ] }, { "attachments": {}, "cell_type": "markdown", "metadata": {}, "source": [ "One of the main usages of the Venue class is to analyze how various features have changed over time. Namely, the features_dict property will return a dict, which includes the venue information and how various features have changed." ] }, { "cell_type": "code", "execution_count": 28, "metadata": {}, "outputs": [ { "data": { "text/plain": [ "{'end_year': 2016,\n", " 'features': {'authors_average_age': {'authors_average_age': {1918: 0.0,\n", " 1923: 0.0,\n", " 1926: 0.0,\n", " 1928: 0.0,\n", " 1929: 0.0,\n", " 1932: 0.0,\n", " 1934: 0.0,\n", " 1940: 0.0,\n", " 1943: 0.0,\n", " 1946: 0.0,\n", " 1951: 0.0,\n", " 1952: 0.0,\n", " 1954: 0.0,\n", " 1955: 0.0,\n", " 1957: 1.1428571428571428,\n", " 1962: 1.8571428571428572,\n", " 1964: 0.5,\n", " 1965: 0.0,\n", " 1966: 0.95,\n", " 1967: 1.6898734177215189,\n", " 1968: 2.739130434782609,\n", " 1969: 2.3157894736842106,\n", " 1970: 2.659090909090909,\n", " 1971: 2.295238095238095,\n", " 1972: 3.5217391304347827,\n", " 1973: 2.6956521739130435,\n", " 1974: 1.5,\n", " 1975: 2.2828054298642533,\n", " 1976: 2.925925925925926,\n", " 1977: 3.4070796460176993,\n", " 1979: 1.8333333333333333,\n", " 1980: 4.521739130434782,\n", " 1981: 4.0,\n", " 1982: 4.228571428571429,\n", " 1983: 9.75,\n", " 1984: 3.933333333333333,\n", " 1985: 2.8666666666666667,\n", " 1986: 5.078651685393258,\n", " 1987: 5.563218390804598,\n", " 1988: 5.538461538461538,\n", " 1989: 6.0,\n", " 1990: 8.713483146067416,\n", " 1991: 6.510964912280702,\n", " 1992: 6.584905660377358,\n", " 1993: 8.534883720930232,\n", " 1994: 6.12962962962963,\n", " 1995: 7.5689512799339385,\n", " 1996: 8.911764705882353,\n", " 1997: 6.425287356321839,\n", " 1998: 7.125,\n", " 1999: 8.304761904761905,\n", " 2000: 8.881422924901186,\n", " 2001: 7.743346007604563,\n", " 2002: 8.675862068965516,\n", " 2003: 10.48502994011976,\n", " 2004: 8.288690476190476,\n", " 2005: 9.352272727272727,\n", " 2006: 10.58695652173913,\n", " 2007: 10.918127125294271,\n", " 2008: 11.955201777119585,\n", " 2009: 11.627538829151732,\n", " 2010: 11.565776458951532,\n", " 2011: 12.705449002921377,\n", " 2012: 12.550796412796146,\n", " 2013: 12.866954213669542,\n", " 2014: 12.62480037576327,\n", " 2015: 12.882088024564995,\n", " 2016: 12.41077441077441}},\n", " 'authors_median_age': {'authors_median_age': {1918: 0.0,\n", " 1923: 0.0,\n", " 1926: 0.0,\n", " 1928: 0.0,\n", " 1929: 0.0,\n", " 1932: 0.0,\n", " 1934: 0.0,\n", " 1940: 0.0,\n", " 1943: 0.0,\n", " 1946: 0.0,\n", " 1951: 0.0,\n", " 1952: 0.0,\n", " 1954: 0.0,\n", " 1955: 0.0,\n", " 1957: 0.0,\n", " 1962: 0.0,\n", " 1964: 0.5,\n", " 1965: 0.0,\n", " 1966: 0.0,\n", " 1967: 0.0,\n", " 1968: 0.0,\n", " 1969: 0.0,\n", " 1970: 0.0,\n", " 1971: 0.0,\n", " 1972: 2.0,\n", " 1973: 0.0,\n", " 1974: 1.0,\n", " 1975: 0.0,\n", " 1976: 0.0,\n", " 1977: 0.0,\n", " 1979: 1.5,\n", " 1980: 0.0,\n", " 1981: 0.0,\n", " 1982: 1.0,\n", " 1983: 5.0,\n", " 1984: 3.0,\n", " 1985: 0.0,\n", " 1986: 2.0,\n", " 1987: 2.0,\n", " 1988: 1.0,\n", " 1989: 2.0,\n", " 1990: 7.0,\n", " 1991: 3.0,\n", " 1992: 3.0,\n", " 1993: 5.0,\n", " 1994: 0.0,\n", " 1995: 4.0,\n", " 1996: 5.0,\n", " 1997: 1.0,\n", " 1998: 3.0,\n", " 1999: 5.0,\n", " 2000: 5.0,\n", " 2001: 3.0,\n", " 2002: 6.0,\n", " 2003: 8.0,\n", " 2004: 5.0,\n", " 2005: 7.0,\n", " 2006: 8.0,\n", " 2007: 8.0,\n", " 2008: 9.0,\n", " 2009: 9.0,\n", " 2010: 9.0,\n", " 2011: 10.0,\n", " 2012: 10.0,\n", " 2013: 10.0,\n", " 2014: 10.0,\n", " 2015: 10.0,\n", " 2016: 9.0}},\n", " 'authors_number': {'authors_number': {1918: 1,\n", " 1919: 0,\n", " 1920: 0,\n", " 1921: 0,\n", " 1922: 0,\n", " 1923: 1,\n", " 1924: 0,\n", " 1925: 0,\n", " 1926: 1,\n", " 1927: 0,\n", " 1928: 1,\n", " 1929: 1,\n", " 1930: 0,\n", " 1931: 0,\n", " 1932: 1,\n", " 1933: 0,\n", " 1934: 1,\n", " 1935: 0,\n", " 1936: 0,\n", " 1937: 0,\n", " 1938: 0,\n", " 1939: 0,\n", " 1940: 2,\n", " 1941: 0,\n", " 1942: 0,\n", " 1943: 1,\n", " 1944: 0,\n", " 1945: 0,\n", " 1946: 1,\n", " 1947: 0,\n", " 1948: 0,\n", " 1949: 0,\n", " 1950: 0,\n", " 1951: 7,\n", " 1952: 1,\n", " 1953: 0,\n", " 1954: 1,\n", " 1955: 2,\n", " 1956: 0,\n", " 1957: 7,\n", " 1958: 0,\n", " 1959: 0,\n", " 1960: 0,\n", " 1961: 0,\n", " 1962: 7,\n", " 1963: 0,\n", " 1964: 2,\n", " 1965: 1,\n", " 1966: 40,\n", " 1967: 158,\n", " 1968: 46,\n", " 1969: 19,\n", " 1970: 44,\n", " 1971: 105,\n", " 1972: 23,\n", " 1973: 253,\n", " 1974: 4,\n", " 1975: 442,\n", " 1976: 54,\n", " 1977: 113,\n", " 1978: 0,\n", " 1979: 6,\n", " 1980: 23,\n", " 1981: 8,\n", " 1982: 35,\n", " 1983: 8,\n", " 1984: 15,\n", " 1985: 30,\n", " 1986: 89,\n", " 1987: 87,\n", " 1988: 91,\n", " 1989: 83,\n", " 1990: 178,\n", " 1991: 456,\n", " 1992: 106,\n", " 1993: 215,\n", " 1994: 54,\n", " 1995: 1211,\n", " 1996: 272,\n", " 1997: 87,\n", " 1998: 152,\n", " 1999: 105,\n", " 2000: 253,\n", " 2001: 526,\n", " 2002: 145,\n", " 2003: 167,\n", " 2004: 336,\n", " 2005: 176,\n", " 2006: 552,\n", " 2007: 3823,\n", " 2008: 5402,\n", " 2009: 6696,\n", " 2010: 7077,\n", " 2011: 7873,\n", " 2012: 7471,\n", " 2013: 9042,\n", " 2014: 10645,\n", " 2015: 4885,\n", " 2016: 297}},\n", " 'first_authors_average_age': {'first_authors_average_age': {1918: 0.0,\n", " 1923: 0.0,\n", " 1926: 0.0,\n", " 1928: 0.0,\n", " 1929: 0.0,\n", " 1932: 0.0,\n", " 1934: 0.0,\n", " 1940: 0.0,\n", " 1943: 0.0,\n", " 1946: 0.0,\n", " 1951: 0.0,\n", " 1952: 0.0,\n", " 1954: 0.0,\n", " 1955: 0.0,\n", " 1957: 0.0,\n", " 1962: 2.0,\n", " 1964: 0.5,\n", " 1965: 0.0,\n", " 1966: 1.0588235294117647,\n", " 1967: 1.2835820895522387,\n", " 1968: 2.588235294117647,\n", " 1969: 1.7142857142857142,\n", " 1970: 3.875,\n", " 1971: 3.238095238095238,\n", " 1972: 2.5,\n", " 1973: 2.603960396039604,\n", " 1974: 0.6666666666666666,\n", " 1975: 1.8580246913580247,\n", " 1976: 4.409090909090909,\n", " 1977: 4.081632653061225,\n", " 1979: 2.2,\n", " 1980: 4.125,\n", " 1981: 2.8,\n", " 1982: 3.3125,\n", " 1983: 14.4,\n", " 1984: 2.6666666666666665,\n", " 1985: 3.2857142857142856,\n", " 1986: 5.12,\n", " 1987: 5.1,\n", " 1988: 2.4166666666666665,\n", " 1989: 5.85,\n", " 1990: 6.770833333333333,\n", " 1991: 6.051851851851852,\n", " 1992: 6.583333333333333,\n", " 1993: 5.655172413793103,\n", " 1994: 5.823529411764706,\n", " 1995: 6.372262773722627,\n", " 1996: 7.490196078431373,\n", " 1997: 6.538461538461538,\n", " 1998: 7.571428571428571,\n", " 1999: 8.478260869565217,\n", " 2000: 5.617021276595745,\n", " 2001: 12.6,\n", " 2002: 9.1,\n", " 2003: 9.484848484848484,\n", " 2004: 8.23076923076923,\n", " 2005: 9.241379310344827,\n", " 2006: 8.946236559139784,\n", " 2007: 8.711320754716981,\n", " 2008: 8.77928483353884,\n", " 2009: 9.376767676767678,\n", " 2010: 9.710091743119266,\n", " 2011: 10.80352422907489,\n", " 2012: 10.764855687606111,\n", " 2013: 11.044750430292599,\n", " 2014: 10.708551483420594,\n", " 2015: 9.763005780346822,\n", " 2016: 7.975609756097561}},\n", " 'first_authors_median_age': {'first_authors_median_age': {1918: 0.0,\n", " 1923: 0.0,\n", " 1926: 0.0,\n", " 1928: 0.0,\n", " 1929: 0.0,\n", " 1932: 0.0,\n", " 1934: 0.0,\n", " 1940: 0.0,\n", " 1943: 0.0,\n", " 1946: 0.0,\n", " 1951: 0.0,\n", " 1952: 0.0,\n", " 1954: 0.0,\n", " 1955: 0.0,\n", " 1957: 0.0,\n", " 1962: 0.0,\n", " 1964: 0.5,\n", " 1965: 0.0,\n", " 1966: 0.0,\n", " 1967: 0.0,\n", " 1968: 0.0,\n", " 1969: 0.0,\n", " 1970: 0.5,\n", " 1971: 0.0,\n", " 1972: 0.0,\n", " 1973: 0.0,\n", " 1974: 0.0,\n", " 1975: 0.0,\n", " 1976: 2.0,\n", " 1977: 1.0,\n", " 1979: 3.0,\n", " 1980: 0.5,\n", " 1981: 0.0,\n", " 1982: 1.0,\n", " 1983: 22.0,\n", " 1984: 0.0,\n", " 1985: 2.0,\n", " 1986: 1.0,\n", " 1987: 2.0,\n", " 1988: 0.0,\n", " 1989: 1.0,\n", " 1990: 3.0,\n", " 1991: 2.0,\n", " 1992: 2.0,\n", " 1993: 3.5,\n", " 1994: 0.0,\n", " 1995: 3.0,\n", " 1996: 5.0,\n", " 1997: 2.0,\n", " 1998: 4.0,\n", " 1999: 2.0,\n", " 2000: 2.0,\n", " 2001: 12.0,\n", " 2002: 6.5,\n", " 2003: 8.0,\n", " 2004: 3.0,\n", " 2005: 6.0,\n", " 2006: 7.0,\n", " 2007: 6.0,\n", " 2008: 6.0,\n", " 2009: 6.0,\n", " 2010: 6.0,\n", " 2011: 7.0,\n", " 2012: 7.0,\n", " 2013: 7.0,\n", " 2014: 7.0,\n", " 2015: 6.0,\n", " 2016: 3.0}},\n", " 'first_avg_female_probability': {'first_avg_female_probability': {1918: 0.35070140280561124,\n", " 1923: 0.004680832956158731,\n", " 1926: 0.004867979628682129,\n", " 1928: 0.5282574568288854,\n", " 1929: 0.005774155794237901,\n", " 1932: 0.06453455168475153,\n", " 1934: 0.003750603438672062,\n", " 1940: 0.13438644688644685,\n", " 1943: 0.24189307624890444,\n", " 1946: 0.008391251208522577,\n", " 1951: 0.315175005941605,\n", " 1952: 0.13438644688644685,\n", " 1954: 0.00479389927823648,\n", " 1955: 0.8401149425287356,\n", " 1957: 0.12407109220720036,\n", " 1962: 0.1826050394440914,\n", " 1964: 0.26689824520978356,\n", " 1965: 0.005463780662060658,\n", " 1966: 0.28939540912616907,\n", " 1967: 0.2010129335722248,\n", " 1968: 0.14135541439199723,\n", " 1969: 0.1346160135559795,\n", " 1970: 0.1587630472056147,\n", " 1971: 0.1574737545215158,\n", " 1972: 0.342273092699562,\n", " 1973: 0.13227575626678303,\n", " 1974: 0.005458806116400298,\n", " 1975: 0.19055259420703027,\n", " 1976: 0.1918031318929913,\n", " 1977: 0.13027206922700393,\n", " 1979: 0.06395127483146415,\n", " 1980: 0.03643939931775009,\n", " 1981: 0.06020029205799875,\n", " 1982: 0.23919278235498972,\n", " 1983: 0.05112736392881778,\n", " 1984: 0.1790365765937493,\n", " 1985: 0.2880316887779246,\n", " 1986: 0.1491416912348935,\n", " 1987: 0.24938566255897374,\n", " 1988: 0.26296488046855654,\n", " 1989: 0.18300378465428152,\n", " 1990: 0.30188359121241465,\n", " 1991: 0.21755980202305653,\n", " 1992: 0.2857559012782039,\n", " 1993: 0.24616981195583407,\n", " 1994: 0.29658114492996884,\n", " 1995: 0.21802378718030122,\n", " 1996: 0.16012733262634976,\n", " 1997: 0.09710852295997963,\n", " 1998: 0.22497253408973816,\n", " 1999: 0.16029761993628883,\n", " 2000: 0.2727972698460485,\n", " 2001: 0.16045165740184522,\n", " 2002: 0.3068046602397014,\n", " 2003: 0.30752460484947397,\n", " 2004: 0.2608312070840388,\n", " 2005: 0.23887456066207272,\n", " 2006: 0.22639404465770113,\n", " 2007: 0.25971664131474587,\n", " 2008: 0.25394357860539246,\n", " 2009: 0.27849767632553635,\n", " 2010: 0.2590454468436737,\n", " 2011: 0.2723014186712317,\n", " 2012: 0.26644313410373743,\n", " 2013: 0.2878282898784816,\n", " 2014: 0.2960471392628223,\n", " 2015: 0.3028015486637,\n", " 2016: 0.41806513000241635}},\n", " 'last_authors_average_age': {'last_authors_average_age': {1918: 0.0,\n", " 1923: 0.0,\n", " 1926: 0.0,\n", " 1928: 0.0,\n", " 1929: 0.0,\n", " 1932: 0.0,\n", " 1934: 0.0,\n", " 1940: 0.0,\n", " 1943: 0.0,\n", " 1946: 0.0,\n", " 1951: 0.0,\n", " 1952: 0.0,\n", " 1954: 0.0,\n", " 1955: 0.0,\n", " 1957: 0.0,\n", " 1962: 0.6,\n", " 1964: 0.5,\n", " 1965: 0.0,\n", " 1966: 1.6470588235294117,\n", " 1967: 1.3880597014925373,\n", " 1968: 2.3529411764705883,\n", " 1969: 3.857142857142857,\n", " 1970: 3.375,\n", " 1971: 3.8333333333333335,\n", " 1972: 4.9,\n", " 1973: 3.9207920792079207,\n", " 1974: 1.3333333333333333,\n", " 1975: 3.0617283950617282,\n", " 1976: 3.6363636363636362,\n", " 1977: 3.693877551020408,\n", " 1979: 1.6,\n", " 1980: 6.5,\n", " 1981: 3.6,\n", " 1982: 3.8125,\n", " 1983: 10.4,\n", " 1984: 3.0,\n", " 1985: 2.4285714285714284,\n", " 1986: 8.2,\n", " 1987: 9.75,\n", " 1988: 9.875,\n", " 1989: 11.9,\n", " 1990: 11.583333333333334,\n", " 1991: 10.214814814814815,\n", " 1992: 8.541666666666666,\n", " 1993: 12.948275862068966,\n", " 1994: 6.470588235294118,\n", " 1995: 11.510948905109489,\n", " 1996: 15.019607843137255,\n", " 1997: 11.923076923076923,\n", " 1998: 11.142857142857142,\n", " 1999: 13.08695652173913,\n", " 2000: 13.063829787234043,\n", " 2001: 15.225,\n", " 2002: 15.166666666666666,\n", " 2003: 14.575757575757576,\n", " 2004: 13.794871794871796,\n", " 2005: 14.689655172413794,\n", " 2006: 14.10752688172043,\n", " 2007: 17.247169811320756,\n", " 2008: 18.077681874229345,\n", " 2009: 17.376767676767678,\n", " 2010: 16.155045871559633,\n", " 2011: 18.59647577092511,\n", " 2012: 18.86672325976231,\n", " 2013: 19.987951807228917,\n", " 2014: 19.81500872600349,\n", " 2015: 19.753371868978807,\n", " 2016: 18.463414634146343}},\n", " 'last_authors_median_age': {'last_authors_median_age': {1918: 0.0,\n", " 1923: 0.0,\n", " 1926: 0.0,\n", " 1928: 0.0,\n", " 1929: 0.0,\n", " 1932: 0.0,\n", " 1934: 0.0,\n", " 1940: 0.0,\n", " 1943: 0.0,\n", " 1946: 0.0,\n", " 1951: 0.0,\n", " 1952: 0.0,\n", " 1954: 0.0,\n", " 1955: 0.0,\n", " 1957: 0.0,\n", " 1962: 0.6,\n", " 1964: 0.5,\n", " 1965: 0.0,\n", " 1966: 1.6470588235294117,\n", " 1967: 1.3880597014925373,\n", " 1968: 2.3529411764705883,\n", " 1969: 3.857142857142857,\n", " 1970: 3.375,\n", " 1971: 3.8333333333333335,\n", " 1972: 4.9,\n", " 1973: 3.9207920792079207,\n", " 1974: 1.3333333333333333,\n", " 1975: 3.0617283950617282,\n", " 1976: 3.6363636363636362,\n", " 1977: 3.693877551020408,\n", " 1979: 1.6,\n", " 1980: 6.5,\n", " 1981: 3.6,\n", " 1982: 3.8125,\n", " 1983: 10.4,\n", " 1984: 3.0,\n", " 1985: 2.4285714285714284,\n", " 1986: 8.2,\n", " 1987: 9.75,\n", " 1988: 9.875,\n", " 1989: 11.9,\n", " 1990: 11.583333333333334,\n", " 1991: 10.214814814814815,\n", " 1992: 8.541666666666666,\n", " 1993: 12.948275862068966,\n", " 1994: 6.470588235294118,\n", " 1995: 11.510948905109489,\n", " 1996: 15.019607843137255,\n", " 1997: 11.923076923076923,\n", " 1998: 11.142857142857142,\n", " 1999: 13.08695652173913,\n", " 2000: 13.063829787234043,\n", " 2001: 15.225,\n", " 2002: 15.166666666666666,\n", " 2003: 14.575757575757576,\n", " 2004: 13.794871794871796,\n", " 2005: 14.689655172413794,\n", " 2006: 14.10752688172043,\n", " 2007: 17.247169811320756,\n", " 2008: 18.077681874229345,\n", " 2009: 17.376767676767678,\n", " 2010: 16.155045871559633,\n", " 2011: 18.59647577092511,\n", " 2012: 18.86672325976231,\n", " 2013: 19.987951807228917,\n", " 2014: 19.81500872600349,\n", " 2015: 19.753371868978807,\n", " 2016: 18.463414634146343}},\n", " 'last_avg_female_probability': {'last_avg_female_probability': {1918: 0.35070140280561124,\n", " 1923: 0.004680832956158731,\n", " 1926: 0.004867979628682129,\n", " 1928: 0.5282574568288854,\n", " 1929: 0.005774155794237901,\n", " 1932: 0.06453455168475153,\n", " 1934: 0.003750603438672062,\n", " 1940: 0.004282635482188768,\n", " 1943: 0.24189307624890444,\n", " 1946: 0.008391251208522577,\n", " 1951: 0.315175005941605,\n", " 1952: 0.13438644688644685,\n", " 1954: 0.00479389927823648,\n", " 1955: 0.003864342306491575,\n", " 1957: 0.2245694881737635,\n", " 1962: 0.030279354292306458,\n", " 1964: 0.26689824520978356,\n", " 1965: 0.005463780662060658,\n", " 1966: 0.25343742062546176,\n", " 1967: 0.19670562812172193,\n", " 1968: 0.12192255044519008,\n", " 1969: 0.2109288807043372,\n", " 1970: 0.2943678155055532,\n", " 1971: 0.1962536301122779,\n", " 1972: 0.22107063893343595,\n", " 1973: 0.13598432281056222,\n", " 1974: 0.00531177634117741,\n", " 1975: 0.18273553226100714,\n", " 1976: 0.23879171696829535,\n", " 1977: 0.21785101736895268,\n", " 1979: 0.06391849389118591,\n", " 1980: 0.23976232036060277,\n", " 1981: 0.005342496350608877,\n", " 1982: 0.21982797611435503,\n", " 1983: 0.003113528800027754,\n", " 1984: 0.5105660785853924,\n", " 1985: 0.1541540765955815,\n", " 1986: 0.15672047456413746,\n", " 1987: 0.12754156814157486,\n", " 1988: 0.09915401198534925,\n", " 1989: 0.042706861677988844,\n", " 1990: 0.20691168215601893,\n", " 1991: 0.19401190232212664,\n", " 1992: 0.15176251438112756,\n", " 1993: 0.1751052498844612,\n", " 1994: 0.2545265977548844,\n", " 1995: 0.1823720864790574,\n", " 1996: 0.11354094469809965,\n", " 1997: 0.10954159459995488,\n", " 1998: 0.17541736780566816,\n", " 1999: 0.1760796350659391,\n", " 2000: 0.263670416098851,\n", " 2001: 0.23012557618713866,\n", " 2002: 0.1826588669192866,\n", " 2003: 0.1834679211653011,\n", " 2004: 0.19799428643333852,\n", " 2005: 0.07064146944587298,\n", " 2006: 0.20599907496384032,\n", " 2007: 0.18116635398390302,\n", " 2008: 0.19971634412449552,\n", " 2009: 0.1909204728560748,\n", " 2010: 0.1965146141115041,\n", " 2011: 0.21914569619998342,\n", " 2012: 0.19332927633332653,\n", " 2013: 0.21546556655845897,\n", " 2014: 0.2102591152473882,\n", " 2015: 0.24209082963478742,\n", " 2016: 0.1449704999732347}},\n", " 'papers_average_length': {'papers_average_length': {1928: (5.0, 1),\n", " 1951: (2.5, 2),\n", " 1955: (2.0, 1),\n", " 1957: (2.0, 1),\n", " 1962: (6.0, 4),\n", " 1964: (1.0, 1),\n", " 1965: (2.0, 1),\n", " 1966: (3.2142857142857144, 14),\n", " 1967: (3.4310344827586206, 58),\n", " 1968: (2.9, 10),\n", " 1969: (3.6666666666666665, 6),\n", " 1970: (3.1538461538461537, 13),\n", " 1971: (3.9411764705882355, 34),\n", " 1972: (4.5, 6),\n", " 1973: (3.551282051282051, 78),\n", " 1974: (5.0, 2),\n", " 1975: (3.574324324324324, 148),\n", " 1976: (3.263157894736842, 19),\n", " 1977: (3.6666666666666665, 39),\n", " 1979: (6.0, 3),\n", " 1980: (3.6666666666666665, 6),\n", " 1981: (4.0, 2),\n", " 1982: (4.923076923076923, 13),\n", " 1983: (3.5, 2),\n", " 1984: (2.0, 2),\n", " 1985: (5.333333333333333, 3),\n", " 1986: (4.75, 20),\n", " 1987: (4.5625, 16),\n", " 1988: (4.142857142857143, 21),\n", " 1989: (4.647058823529412, 17),\n", " 1990: (4.5, 36),\n", " 1991: (4.41, 100),\n", " 1992: (4.125, 16),\n", " 1993: (4.239130434782608, 46),\n", " 1994: (2.8181818181818183, 11),\n", " 1995: (4.131979695431472, 197),\n", " 1996: (4.282051282051282, 39),\n", " 1997: (4.333333333333333, 18),\n", " 1998: (4.75, 12),\n", " 1999: (4.352941176470588, 17),\n", " 2000: (4.171428571428572, 35),\n", " 2001: (4.111111111111111, 18),\n", " 2002: (4.125, 8),\n", " 2003: (4.166666666666667, 12),\n", " 2004: (3.736842105263158, 19),\n", " 2005: (4.0, 7),\n", " 2006: (3.7837837837837838, 37),\n", " 2007: (3.9847908745247147, 263),\n", " 2008: (3.931873479318735, 411),\n", " 2009: (3.992481203007519, 399),\n", " 2010: (4.047961630695443, 417),\n", " 2011: (4.0508905852417305, 393),\n", " 2012: (4.2404761904761905, 420),\n", " 2013: (3.971631205673759, 423),\n", " 2014: (3.8541033434650456, 329),\n", " 2015: (4.027027027027027, 37),\n", " 2016: (5.0, 1)}},\n", " 'papers_number': {'papers_number': {1918: 1,\n", " 1919: 0,\n", " 1920: 0,\n", " 1921: 0,\n", " 1922: 0,\n", " 1923: 1,\n", " 1924: 0,\n", " 1925: 0,\n", " 1926: 1,\n", " 1927: 0,\n", " 1928: 1,\n", " 1929: 1,\n", " 1930: 0,\n", " 1931: 0,\n", " 1932: 1,\n", " 1933: 0,\n", " 1934: 1,\n", " 1935: 0,\n", " 1936: 0,\n", " 1937: 0,\n", " 1938: 0,\n", " 1939: 0,\n", " 1940: 1,\n", " 1941: 0,\n", " 1942: 0,\n", " 1943: 1,\n", " 1944: 0,\n", " 1945: 0,\n", " 1946: 1,\n", " 1947: 0,\n", " 1948: 0,\n", " 1949: 0,\n", " 1950: 0,\n", " 1951: 2,\n", " 1952: 1,\n", " 1953: 0,\n", " 1954: 1,\n", " 1955: 1,\n", " 1956: 0,\n", " 1957: 2,\n", " 1958: 0,\n", " 1959: 0,\n", " 1960: 0,\n", " 1961: 0,\n", " 1962: 5,\n", " 1963: 0,\n", " 1964: 2,\n", " 1965: 1,\n", " 1966: 17,\n", " 1967: 67,\n", " 1968: 17,\n", " 1969: 7,\n", " 1970: 16,\n", " 1971: 42,\n", " 1972: 10,\n", " 1973: 101,\n", " 1974: 3,\n", " 1975: 162,\n", " 1976: 22,\n", " 1977: 49,\n", " 1978: 0,\n", " 1979: 5,\n", " 1980: 8,\n", " 1981: 5,\n", " 1982: 16,\n", " 1983: 5,\n", " 1984: 3,\n", " 1985: 7,\n", " 1986: 25,\n", " 1987: 20,\n", " 1988: 24,\n", " 1989: 20,\n", " 1990: 48,\n", " 1991: 135,\n", " 1992: 24,\n", " 1993: 58,\n", " 1994: 17,\n", " 1995: 274,\n", " 1996: 51,\n", " 1997: 26,\n", " 1998: 21,\n", " 1999: 23,\n", " 2000: 47,\n", " 2001: 40,\n", " 2002: 30,\n", " 2003: 33,\n", " 2004: 39,\n", " 2005: 29,\n", " 2006: 93,\n", " 2007: 530,\n", " 2008: 811,\n", " 2009: 990,\n", " 2010: 1090,\n", " 2011: 1135,\n", " 2012: 1178,\n", " 2013: 1162,\n", " 2014: 1146,\n", " 2015: 519,\n", " 2016: 41}},\n", " 'percentage_of_papers_with_authors_that_publish_before_in_the_same_venue': {'percentage_of_papers_with_authors_that_publish_before_in_the_same_venue': {1918: 0.0,\n", " 1923: 0.0,\n", " 1926: 0.0,\n", " 1928: 0.0,\n", " 1929: 0.0,\n", " 1932: 0.0,\n", " 1934: 0.0,\n", " 1940: 0.0,\n", " 1943: 0.0,\n", " 1946: 0.0,\n", " 1951: 0.0,\n", " 1952: 0.0,\n", " 1954: 0.0,\n", " 1955: 0.0,\n", " 1957: 0.0,\n", " 1962: 0.0,\n", " 1964: 0.0,\n", " 1965: 0.0,\n", " 1966: 0.0,\n", " 1967: 0.0,\n", " 1968: 0.0,\n", " 1969: 0.0,\n", " 1970: 0.0,\n", " 1971: 0.0,\n", " 1972: 0.1,\n", " 1973: 0.0297029702970297,\n", " 1974: 0.0,\n", " 1975: 0.04938271604938271,\n", " 1976: 0.0,\n", " 1977: 0.061224489795918366,\n", " 1979: 0.0,\n", " 1980: 0.0,\n", " 1981: 0.0,\n", " 1982: 0.0625,\n", " 1983: 0.0,\n", " 1984: 0.0,\n", " 1985: 0.0,\n", " 1986: 0.0,\n", " 1987: 0.0,\n", " 1988: 0.0,\n", " 1989: 0.05,\n", " 1990: 0.041666666666666664,\n", " 1991: 0.05925925925925926,\n", " 1992: 0.25,\n", " 1993: 0.034482758620689655,\n", " 1994: 0.058823529411764705,\n", " 1995: 0.10948905109489052,\n", " 1996: 0.11764705882352941,\n", " 1997: 0.11538461538461539,\n", " 1998: 0.23809523809523808,\n", " 1999: 0.2608695652173913,\n", " 2000: 0.1276595744680851,\n", " 2001: 0.175,\n", " 2002: 0.16666666666666666,\n", " 2003: 0.18181818181818182,\n", " 2004: 0.10256410256410256,\n", " 2005: 0.06896551724137931,\n", " 2006: 0.12903225806451613,\n", " 2007: 0.17735849056603772,\n", " 2008: 0.3008631319358816,\n", " 2009: 0.36262626262626263,\n", " 2010: 0.3871559633027523,\n", " 2011: 0.44757709251101324,\n", " 2012: 0.5229202037351444,\n", " 2013: 0.5654044750430293,\n", " 2014: 0.618673647469459,\n", " 2015: 0.6820809248554913,\n", " 2016: 0.7317073170731707}},\n", " 'percentage_of_papers_with_first_authors_that_publish_before_in_the_same_venue': {'percentage_of_papers_with_first_authors_that_publish_before_in_the_same_venue': {1918: 0.0,\n", " 1923: 0.0,\n", " 1926: 0.0,\n", " 1928: 0.0,\n", " 1929: 0.0,\n", " 1932: 0.0,\n", " 1934: 0.0,\n", " 1940: 0.0,\n", " 1943: 0.0,\n", " 1946: 0.0,\n", " 1951: 0.0,\n", " 1952: 0.0,\n", " 1954: 0.0,\n", " 1955: 0.0,\n", " 1957: 0.0,\n", " 1962: 0.0,\n", " 1964: 0.0,\n", " 1965: 0.0,\n", " 1966: 0.0,\n", " 1967: 0.0,\n", " 1968: 0.0,\n", " 1969: 0.0,\n", " 1970: 0.0,\n", " 1971: 0.0,\n", " 1972: 0.0,\n", " 1973: 0.009900990099009901,\n", " 1974: 0.0,\n", " 1975: 0.006172839506172839,\n", " 1976: 0.0,\n", " 1977: 0.04081632653061224,\n", " 1979: 0.0,\n", " 1980: 0.0,\n", " 1981: 0.0,\n", " 1982: 0.0625,\n", " 1983: 0.0,\n", " 1984: 0.0,\n", " 1985: 0.0,\n", " 1986: 0.0,\n", " 1987: 0.0,\n", " 1988: 0.0,\n", " 1989: 0.0,\n", " 1990: 0.0,\n", " 1991: 0.014814814814814815,\n", " 1992: 0.08333333333333333,\n", " 1993: 0.0,\n", " 1994: 0.058823529411764705,\n", " 1995: 0.025547445255474453,\n", " 1996: 0.0,\n", " 1997: 0.038461538461538464,\n", " 1998: 0.0,\n", " 1999: 0.0,\n", " 2000: 0.0,\n", " 2001: 0.075,\n", " 2002: 0.0,\n", " 2003: 0.030303030303030304,\n", " 2004: 0.05128205128205128,\n", " 2005: 0.034482758620689655,\n", " 2006: 0.021505376344086023,\n", " 2007: 0.03207547169811321,\n", " 2008: 0.07274969173859433,\n", " 2009: 0.09797979797979799,\n", " 2010: 0.11834862385321102,\n", " 2011: 0.12863436123348018,\n", " 2012: 0.18930390492359933,\n", " 2013: 0.1764199655765921,\n", " 2014: 0.18673647469458987,\n", " 2015: 0.21001926782273603,\n", " 2016: 0.1951219512195122}},\n", " 'percentage_of_papers_with_last_authors_that_publish_before_in_the_same_venue': {'percentage_of_papers_with_last_authors_that_publish_before_in_the_same_venue': {1918: 0.0,\n", " 1923: 0.0,\n", " 1926: 0.0,\n", " 1928: 0.0,\n", " 1929: 0.0,\n", " 1932: 0.0,\n", " 1934: 0.0,\n", " 1940: 0.0,\n", " 1943: 0.0,\n", " 1946: 0.0,\n", " 1951: 0.0,\n", " 1952: 0.0,\n", " 1954: 0.0,\n", " 1955: 0.0,\n", " 1957: 0.0,\n", " 1962: 0.0,\n", " 1964: 0.0,\n", " 1965: 0.0,\n", " 1966: 0.0,\n", " 1967: 0.0,\n", " 1968: 0.0,\n", " 1969: 0.0,\n", " 1970: 0.0,\n", " 1971: 0.0,\n", " 1972: 0.1,\n", " 1973: 0.009900990099009901,\n", " 1974: 0.0,\n", " 1975: 0.043209876543209874,\n", " 1976: 0.0,\n", " 1977: 0.04081632653061224,\n", " 1979: 0.0,\n", " 1980: 0.0,\n", " 1981: 0.0,\n", " 1982: 0.0,\n", " 1983: 0.0,\n", " 1984: 0.0,\n", " 1985: 0.0,\n", " 1986: 0.0,\n", " 1987: 0.0,\n", " 1988: 0.0,\n", " 1989: 0.05,\n", " 1990: 0.0,\n", " 1991: 0.02962962962962963,\n", " 1992: 0.16666666666666666,\n", " 1993: 0.034482758620689655,\n", " 1994: 0.0,\n", " 1995: 0.08029197080291971,\n", " 1996: 0.0784313725490196,\n", " 1997: 0.07692307692307693,\n", " 1998: 0.09523809523809523,\n", " 1999: 0.17391304347826086,\n", " 2000: 0.0851063829787234,\n", " 2001: 0.075,\n", " 2002: 0.1,\n", " 2003: 0.12121212121212122,\n", " 2004: 0.0,\n", " 2005: 0.0,\n", " 2006: 0.043010752688172046,\n", " 2007: 0.06792452830188679,\n", " 2008: 0.16522811344019728,\n", " 2009: 0.20404040404040405,\n", " 2010: 0.22385321100917432,\n", " 2011: 0.26784140969162995,\n", " 2012: 0.32767402376910015,\n", " 2013: 0.38812392426850256,\n", " 2014: 0.39790575916230364,\n", " 2015: 0.42003853564547206,\n", " 2016: 0.5853658536585366}},\n", " 'top_keywords': {'top_keywords': {1918: {u'engineering education': 1},\n", " 1919: {},\n", " 1920: {},\n", " 1921: {},\n", " 1922: {},\n", " 1923: {},\n", " 1924: {},\n", " 1925: {},\n", " 1926: {},\n", " 1927: {},\n", " 1928: {},\n", " 1929: {},\n", " 1930: {},\n", " 1931: {},\n", " 1932: {},\n", " 1933: {},\n", " 1934: {},\n", " 1935: {},\n", " 1936: {},\n", " 1937: {},\n", " 1938: {},\n", " 1939: {},\n", " 1940: {},\n", " 1941: {},\n", " 1942: {},\n", " 1943: {},\n", " 1944: {},\n", " 1945: {},\n", " 1946: {},\n", " 1947: {},\n", " 1948: {},\n", " 1949: {},\n", " 1950: {},\n", " 1951: {u'embryos': 1},\n", " 1952: {},\n", " 1953: {},\n", " 1954: {},\n", " 1955: {},\n", " 1956: {},\n", " 1957: {u'analysis': 1,\n", " u'archaeology': 1,\n", " u'carbon': 1,\n", " u'carbon isotope': 1,\n", " u'carbon isotopes': 1,\n", " u'coal': 1,\n", " u'database': 1,\n", " u'digital repository': 1,\n", " u'indexation': 1,\n", " u'preservation': 1,\n", " u'quantitative analysis': 1,\n", " u'radioactive isotopes': 1,\n", " u'wood': 1},\n", " 1958: {},\n", " 1959: {},\n", " 1960: {},\n", " 1961: {},\n", " 1962: {u'biochemistry': 1,\n", " u'deoxyribonucleic acid': 1,\n", " u'forest': 1,\n", " u'ionizing radiation': 1,\n", " u'metabolism': 1,\n", " u'morphology': 1,\n", " u'part per million': 1,\n", " u'radiation': 1,\n", " u'radiation dose': 1,\n", " u'ribonucleic acid': 1,\n", " u'seasonality': 1},\n", " 1963: {},\n", " 1964: {u'indexation': 1,\n", " u'information content': 1,\n", " u'information system': 1,\n", " u'science fiction': 1,\n", " u'woody plants': 1},\n", " 1965: {u'charge transfer': 1},\n", " 1966: {u'body temperature': 1,\n", " u'body weight': 1,\n", " u'conditioned stimulus': 1,\n", " u'drug resistance': 1,\n", " u'general': 1,\n", " u'geomagnetic field': 1,\n", " u'growth': 1,\n", " u'life history': 1,\n", " u'low pressure': 1,\n", " u'magnetic anomalies': 1,\n", " u'maternal effect': 1,\n", " u'oxygen evolution': 1,\n", " u'protein synthesis': 1,\n", " u'quantum yield': 1,\n", " u'reaction kinetics': 1},\n", " 1967: {u'action potential': 3,\n", " u'biochemistry': 2,\n", " u'body weight': 2,\n", " u'brush border': 2,\n", " u'carbon dioxide': 1,\n", " u'cba': 1,\n", " u'dna synthesis': 1,\n", " u'electron microscopy': 2,\n", " u'enzyme': 6,\n", " u'genetics': 2,\n", " u'immunoglobulin': 2,\n", " u'magnesium': 3,\n", " u'metabolism': 2,\n", " u'muscle fiber': 2,\n", " u'natural gas': 1,\n", " u'nuclear dna': 1,\n", " u'oxidative phosphorylation': 2,\n", " u'peroxidase': 2,\n", " u'potassium': 2,\n", " u'protein synthesis': 2},\n", " 1968: {u'analysis of variance': 1,\n", " u'cell proliferation': 1,\n", " u'chromium': 1,\n", " u'digital repository': 1,\n", " u'dna synthesis': 1,\n", " u'drug metabolism': 1,\n", " u'enzyme': 3,\n", " u'eye movement': 1,\n", " u'inbred strain': 1,\n", " u'light adaptation': 1,\n", " u'low frequency': 1,\n", " u'lunar geology': 1,\n", " u'microstructures': 1,\n", " u'origin': 1,\n", " u'preservation': 1,\n", " u'radiocarbon dating': 1,\n", " u'salt marsh': 1,\n", " u'smooth endoplasmic reticulum': 2,\n", " u'volcanology': 1,\n", " u'zinc': 1},\n", " 1969: {u'atmospheric models': 1,\n", " u'biological activity': 1,\n", " u'brightness temperature': 1,\n", " u'deficiency': 1,\n", " u'high altitude': 1,\n", " u'k means': 1,\n", " u'membrane potential': 1,\n", " u'phase shift': 1,\n", " u'spectrum analysis': 1,\n", " u'temperature': 1,\n", " u'ultrastructure': 1,\n", " u'voltage clamp': 1,\n", " u'water vapor': 1},\n", " 1970: {u'alpha particles': 1,\n", " u'amino acid': 1,\n", " u'aqueous solution': 1,\n", " u'astronomy': 1,\n", " u'biological clock': 1,\n", " u'cell division': 1,\n", " u'circadian rhythm': 1,\n", " u'enzyme': 2,\n", " u'enzyme activity': 1,\n", " u'escherichia coli': 1,\n", " u'fourier analysis': 1,\n", " u'low frequency': 1,\n", " u'measurement': 1,\n", " u'messenger rna': 1,\n", " u'organ culture': 1,\n", " u'physical sciences': 1,\n", " u'receptive field': 1,\n", " u'tobacco mosaic virus': 1,\n", " u'turnover rate': 1,\n", " u'uranium': 1},\n", " 1971: {u'cell culture': 3,\n", " u'cell line': 1,\n", " u'charged particles': 3,\n", " u'chemical composition': 1,\n", " u'circadian rhythm': 2,\n", " u'compound action potential': 1,\n", " u'crystal defects': 1,\n", " u'crystal structure': 1,\n", " u'dna synthesis': 1,\n", " u'ecology': 1,\n", " u'energy levels': 2,\n", " u'glycoprotein': 1,\n", " u'ion beam': 2,\n", " u'messenger rna': 1,\n", " u'mineralogy': 1,\n", " u'nitrogen': 2,\n", " u'oscillations': 1,\n", " u'phosphodiesterase': 1,\n", " u'physical properties': 3,\n", " u'spectral sensitivity': 2},\n", " 1972: {u'active transport': 1,\n", " u'algae': 1,\n", " u'bacteria': 1,\n", " u'behavior modification': 1,\n", " u'biomass': 1,\n", " u'embryos': 1,\n", " u'fourier transform spectroscopy': 1,\n", " u'geothermal energy': 1,\n", " u'infrared': 1,\n", " u'microorganisms': 1,\n", " u'nuclear magnetic resonance spectroscopy': 1,\n", " u'potassium': 1,\n", " u'precipitation': 1,\n", " u'renewable energy sources': 1,\n", " u'seasonality': 1,\n", " u'sediments': 1,\n", " u'sexual differentiation': 1},\n", " 1973: {u'adrenergic': 2,\n", " u'cell growth': 2,\n", " u'cell line': 3,\n", " u'chondrites': 2,\n", " u'climate change': 2,\n", " u'cyclic amp': 3,\n", " u'dopamine': 5,\n", " u'electron microscopy': 2,\n", " u'enzyme': 9,\n", " u'fertility': 2,\n", " u'genetics': 4,\n", " u'metabolism': 2,\n", " u'nervous system': 3,\n", " u'physiology': 2,\n", " u'polyacrylamide gel electrophoresis': 2,\n", " u'population': 2,\n", " u'population dynamics': 2,\n", " u'receptive field': 2,\n", " u'thermal conductivity': 2,\n", " u'upper mantle': 2},\n", " 1974: {u'cell cycle': 1,\n", " u'environmental education': 1,\n", " u'food processing': 1,\n", " u'industry': 1,\n", " u'innovation': 1,\n", " u'kinetics': 1,\n", " u'pollution': 1,\n", " u'water pollution': 1},\n", " 1975: {u'amino acid': 5,\n", " u'atmospheric chemistry': 2,\n", " u'biological activity': 3,\n", " u'carbon monoxide': 2,\n", " u'cell line': 4,\n", " u'central nervous system': 2,\n", " u'chemical composition': 2,\n", " u'climate change': 2,\n", " u'cyclic amp': 4,\n", " u'electron microscopy': 5,\n", " u'enzyme': 3,\n", " u'fission product': 2,\n", " u'immunoglobulin': 4,\n", " u'infrared': 2,\n", " u'iron': 3,\n", " u'pathology': 3,\n", " u'rough endoplasmic reticulum': 2,\n", " u'smooth endoplasmic reticulum': 2,\n", " u'visual stimuli': 2,\n", " u'vitamin d': 2},\n", " 1976: {u'amino acid': 1,\n", " u'amino acid sequence': 1,\n", " u'artificial intelligence': 1,\n", " u'cba': 1,\n", " u'cell line': 1,\n", " u'conditioned stimulus': 1,\n", " u'cooperation': 1,\n", " u'cybernetics': 1,\n", " u'dopamine': 1,\n", " u'electrophysiology': 1,\n", " u'image processing': 1,\n", " u'infection control': 1,\n", " u'information processing': 1,\n", " u'motor coordination': 1,\n", " u'myocardial infarct': 1,\n", " u'neuronal activity': 1,\n", " u'nitrogen': 1,\n", " u'proactive interference': 1,\n", " u'protein kinase a': 1,\n", " u'serology': 1},\n", " 1977: {u'amino acid': 2,\n", " u'atmospheric chemistry': 2,\n", " u'cell culture': 2,\n", " u'cell line': 2,\n", " u'central nervous system': 2,\n", " u'chemical composition': 1,\n", " u'circadian rhythm': 2,\n", " u'dna synthesis': 2,\n", " u'dopamine': 3,\n", " u'endothelial cell': 1,\n", " u'enzyme': 4,\n", " u'genetics': 2,\n", " u'glutamate': 2,\n", " u'magnesium': 2,\n", " u'mass spectrometry': 2,\n", " u'nitrogen': 1,\n", " u'ozone': 2,\n", " u'stratosphere': 2,\n", " u'strontium isotopes': 1,\n", " u'weight loss': 1},\n", " 1978: {},\n", " 1979: {u'boundary condition': 1,\n", " u'cellular differentiation': 1,\n", " u'chemical synthesis': 1,\n", " u'dna replication': 1,\n", " u'dopamine': 1,\n", " u'extracellular matrix': 1,\n", " u'gene expression': 1,\n", " u'genetics': 2,\n", " u'left hemisphere': 1,\n", " u'molecular genetics': 1,\n", " u'nucleotide sequence': 1,\n", " u'pattern formation': 1,\n", " u'random walk': 1,\n", " u'rare species': 1,\n", " u'restriction endonuclease': 1,\n", " u'seed dispersal': 1,\n", " u'spatial pattern': 1,\n", " u'species abundance': 1,\n", " u'stochastic model': 1,\n", " u'tropical dry forest': 1},\n", " 1980: {u'bacteria': 1,\n", " u'carbon dioxide': 1,\n", " u'crystal structure': 1,\n", " u'deep sea': 1,\n", " u'face centered cubic': 1,\n", " u'food chain': 1,\n", " u'genetic diversity': 1,\n", " u'genetics': 1,\n", " u'geothermal energy': 1,\n", " u'high pressure': 1,\n", " u'illustrations': 1,\n", " u'organic carbon': 1,\n", " u'phase change': 1,\n", " u'primary production': 1,\n", " u'production': 1,\n", " u'reduction': 1,\n", " u'sampling': 1,\n", " u'sea bed': 1,\n", " u'seas': 1,\n", " u'space time': 1},\n", " 1981: {u'cognitive processes': 1,\n", " u'conflict resolution': 1,\n", " u'decision problem': 1,\n", " u'genetics': 2,\n", " u'heredity': 1,\n", " u'higher education': 2,\n", " u'intelligence': 1,\n", " u'psychology': 1,\n", " u'rational choice': 1,\n", " u'science education': 2,\n", " u'sex differentiation': 1,\n", " u'social science': 1,\n", " u'theories': 1,\n", " u'x chromosome': 1},\n", " 1982: {u'art': 1,\n", " u'axonal transport': 1,\n", " u'black hole': 1,\n", " u'communications': 1,\n", " u'computer graphics': 2,\n", " u'computer science': 5,\n", " u'data acquisition': 1,\n", " u'economic impact': 1,\n", " u'gallium arsenide': 1,\n", " u'gene mapping': 1,\n", " u'higher education': 5,\n", " u'immunoglobulin heavy chain': 1,\n", " u'information management': 1,\n", " u'instrumentation': 1,\n", " u'nucleotides': 2,\n", " u'science education': 5,\n", " u'semiconductor devices': 1,\n", " u'software design': 1,\n", " u'technology': 3,\n", " u'telecommunications': 1},\n", " 1983: {u'biochemistry': 1,\n", " u'cancer': 1,\n", " u'data analysis': 1,\n", " u'defense mechanism': 1,\n", " u'dna': 1,\n", " u'dna damage': 1,\n", " u'linear elasticity': 1,\n", " u'metabolism': 1,\n", " u'pesticides': 1,\n", " u'seismic hazard': 1},\n", " 1984: {u'enzyme': 1, u'genome sequence': 1, u'glutathione': 1},\n", " 1985: {u'copper': 1,\n", " u'dna fragmentation': 1,\n", " u'enzyme': 1,\n", " u'feedback mechanism': 1,\n", " u'gene expression': 1,\n", " u'gene fusion': 1,\n", " u'input output': 1,\n", " u'integrated circuit design': 1,\n", " u'ligand binding': 1,\n", " u'metallothionein': 1,\n", " u'monoclonal antibody': 1,\n", " u'parallel computer': 1,\n", " u'parallel processing': 1,\n", " u'partial differential equation': 1,\n", " u'protein structure': 1,\n", " u'real time': 1,\n", " u'structural change': 1,\n", " u'structural dynamics': 1,\n", " u'time sharing': 1,\n", " u'transaction processing': 1},\n", " 1986: {u'active site': 1,\n", " u'amino acid': 2,\n", " u'conservation biology': 1,\n", " u'crystal structure': 2,\n", " u'electron density': 1,\n", " u'enzyme': 3,\n", " u'frozen section': 1,\n", " u'genetics': 3,\n", " u'growth cone': 2,\n", " u'intuition': 1,\n", " u'magnetic field': 1,\n", " u'messenger rna': 1,\n", " u'molecular cloning': 1,\n", " u'molecular probe': 1,\n", " u'monoclonal antibody': 1,\n", " u'natural resource': 1,\n", " u'nervous system': 2,\n", " u'nucleotide sequence': 1,\n", " u'social cognition': 1,\n", " u'zinc': 1},\n", " 1987: {u'amino acid': 3,\n", " u'amino acid sequence': 2,\n", " u'binding protein': 2,\n", " u'binding site': 2,\n", " u'escherichia coli': 2,\n", " u'gene regulation': 2,\n", " u'gene transcription': 1,\n", " u'genetics': 4,\n", " u'major histocompatibility complex': 2,\n", " u'membrane protein': 1,\n", " u'messenger rna': 1,\n", " u'metallothionein': 1,\n", " u'molecular cloning': 1,\n", " u'molecular structure': 1,\n", " u'neural cell adhesion molecule': 1,\n", " u'nuclear waste': 1,\n", " u'nucleic acid': 2,\n", " u'path integral': 1,\n", " u'protein folding': 1,\n", " u'wild type': 1},\n", " 1988: {u'amino acid sequence': 2,\n", " u'binding site': 2,\n", " u'cell line': 2,\n", " u'circular dichroism': 1,\n", " u'conflict resolution': 1,\n", " u'crystal structure': 1,\n", " u'dna binding domain': 2,\n", " u'enzyme': 2,\n", " u'gene transcription': 1,\n", " u'genetics': 2,\n", " u'glycoprotein': 1,\n", " u'heuristics': 1,\n", " u'high resolution': 2,\n", " u'higher education': 1,\n", " u'hydrogen bond': 2,\n", " u'messenger rna': 3,\n", " u'reverse transcriptase': 2,\n", " u'scanning tunneling microscope': 1,\n", " u'tumor necrosis factor': 1,\n", " u'wild type': 2},\n", " 1989: {u'amino acid': 2,\n", " u'binding sites': 1,\n", " u'cell line': 1,\n", " u'dna binding proteins': 1,\n", " u'energy balance': 1,\n", " u'energy gap': 1,\n", " u'enzyme': 2,\n", " u'genetics': 2,\n", " u'gtp binding protein': 2,\n", " u'ion transport': 1,\n", " u'laser spectroscopy': 1,\n", " u'membrane protein': 1,\n", " u'messenger rna': 2,\n", " u'monoclonal antibody': 2,\n", " u'nuclear astrophysics': 1,\n", " u'secretory pathway': 1,\n", " u'signal transduction pathway': 1,\n", " u'strontium isotopes': 1,\n", " u'structural stability': 1,\n", " u't cell receptor': 1},\n", " 1990: {u'amino acid sequence': 3,\n", " u'atmospheric circulation': 3,\n", " u'atmospheric modeling': 5,\n", " u'atmospheric models': 5,\n", " u'bee venom': 2,\n", " u'binding site': 3,\n", " u'biotechnology': 4,\n", " u'dna sequence': 2,\n", " u'enzyme': 2,\n", " u'gene transfer': 2,\n", " u'genetics': 5,\n", " u'greenhouse effect': 3,\n", " u'high pressure': 2,\n", " u'messenger rna': 3,\n", " u'methane': 2,\n", " u'monoclonal antibody': 3,\n", " u'nitrogen': 6,\n", " u'phospholipase a2': 2,\n", " u'planetary geology': 3,\n", " u'triton': 9},\n", " 1991: {u'active site': 4,\n", " u'amino acid': 11,\n", " u'amino acid sequence': 6,\n", " u'base pair': 6,\n", " u'binding protein': 6,\n", " u'central nervous system': 4,\n", " u'crystal structure': 5,\n", " u'dna sequence': 7,\n", " u'enzyme': 10,\n", " u'genetic engineering': 4,\n", " u'glutamate': 5,\n", " u'glutamate receptor': 5,\n", " u'major histocompatibility complex': 4,\n", " u'nervous system': 4,\n", " u'polymerase chain reaction': 6,\n", " u'potassium channel': 4,\n", " u'signal transduction': 4,\n", " u'spectrum': 4,\n", " u'transcription factor': 4,\n", " u'wild type': 6},\n", " 1992: {u'amino acid': 2,\n", " u'atmospheric chemistry': 1,\n", " u'atomic force microscope': 2,\n", " u'binding protein': 2,\n", " u'calmodulin': 1,\n", " u'cell line': 2,\n", " u'chemical composition': 1,\n", " u'electron microscope': 1,\n", " u'enzyme': 1,\n", " u'genetics': 2,\n", " u'health': 1,\n", " u'hydrogen peroxide': 1,\n", " u'ion channel': 1,\n", " u'messenger rna': 1,\n", " u'molecular cloning': 1,\n", " u'optical resonator': 1,\n", " u'potassium channel': 1,\n", " u'quantum electrodynamics': 1,\n", " u'ribosomal rna': 1,\n", " u'sodium channel': 1},\n", " 1993: {u'active site': 2,\n", " u'amino acid sequence': 2,\n", " u'carbon dioxide': 2,\n", " u'chemical reaction': 3,\n", " u'dna fragmentation': 2,\n", " u'dna sequence': 4,\n", " u'enzyme': 2,\n", " u'escherichia coli': 2,\n", " u'genes': 2,\n", " u'genetics': 6,\n", " u'kinetics': 2,\n", " u'messenger rna': 2,\n", " u'mitogen activated protein kinase': 2,\n", " u'rate limiting': 2,\n", " u'signal transduction': 2,\n", " u'stochastic process': 2,\n", " u'structure function': 2,\n", " u'three dimensional': 2,\n", " u'wild type': 3,\n", " u'x ray diffraction': 3},\n", " 1994: {u'amino acid': 1,\n", " u'calcium channel': 1,\n", " u'carbon nanotube': 1,\n", " u'chemical reaction': 1,\n", " u'electric conductivity': 1,\n", " u'enzyme activity': 1,\n", " u'host range': 1,\n", " u'iron': 1,\n", " u'molecular sieve': 1,\n", " u'nuclear magnetic resonance': 1,\n", " u'physical properties': 1,\n", " u'selected area electron diffraction': 1,\n", " u'short term memory': 1,\n", " u'structural change': 1,\n", " u'synaptic vesicle': 1,\n", " u'transgenic mice': 1},\n", " 1995: {u'amino acid': 6,\n", " u'amino acid sequence': 5,\n", " u'binding protein': 6,\n", " u'carbon dioxide': 6,\n", " u'cell cycle': 7,\n", " u'cell death': 6,\n", " u'cell line': 6,\n", " u'crystal structure': 6,\n", " u'environmental science': 13,\n", " u'environmental sciences': 5,\n", " u'enzyme': 16,\n", " u'escherichia coli': 8,\n", " u'gene expression': 8,\n", " u'genetics': 11,\n", " u'hydrogen bond': 6,\n", " u'magnesium': 6,\n", " u'magnetic field': 5,\n", " u'signal transduction': 7,\n", " u'signal transduction pathway': 5,\n", " u'transcription factor': 12},\n", " 1996: {u'carbon dioxide': 3,\n", " u'crystal chemistry': 1,\n", " u'crystal structure': 2,\n", " u'environmental science': 2,\n", " u'enzyme': 3,\n", " u'escherichia coli': 4,\n", " u'genetics': 3,\n", " u'genome sequence': 1,\n", " u'germinal center': 2,\n", " u'grain growth': 1,\n", " u'higher order': 1,\n", " u'immune response': 2,\n", " u'immunoglobulin': 2,\n", " u'loss of heterozygosity': 1,\n", " u'messenger rna': 1,\n", " u'metal insulator transition': 1,\n", " u'potassium channel': 1,\n", " u'self assembly': 2,\n", " u'transcription factor': 2,\n", " u'yeast two hybrid system': 2},\n", " 1997: {u'atmospheric chemistry': 1,\n", " u'block copolymer': 1,\n", " u'bose einstein condensate': 1,\n", " u'conservation biology': 1,\n", " u'coral reef': 1,\n", " u'environmental science': 1,\n", " u'glycogen synthase kinase 3': 1,\n", " u'high pressure': 1,\n", " u'language acquisition': 1,\n", " u'life span': 1,\n", " u'matter wave': 1,\n", " u'nmda receptor': 1,\n", " u'nuclear export': 1,\n", " u'restoration ecology': 1,\n", " u'sensory system': 1},\n", " 1998: {u'air quality': 1,\n", " u'albedo': 1,\n", " u'atmosphere': 1,\n", " u'cenozoic': 1,\n", " u'climate change': 1,\n", " u'climatic change': 1,\n", " u'cryptic species': 1,\n", " u'environmental health': 1,\n", " u'food security': 1,\n", " u'insolation': 1,\n", " u'metals': 1,\n", " u'natural disasters': 1,\n", " u'organic carbon': 1,\n", " u'paleoclimate': 1,\n", " u'social change': 1,\n", " u'solar system': 1,\n", " u'steady state': 1,\n", " u'temperature': 1,\n", " u'upper bound': 1,\n", " u'weather': 1},\n", " 1999: {u'active site': 1,\n", " u'adaptation': 1,\n", " u'base pair': 2,\n", " u'chemical properties': 1,\n", " u'crack propagation': 1,\n", " u'genetics': 2,\n", " u'geology': 1,\n", " u'high pressure': 1,\n", " u'homo': 1,\n", " u'mirror symmetry': 1,\n", " u'molecular structure': 1,\n", " u'nmda receptor': 2,\n", " u'phylogeny': 2,\n", " u'satisfiability': 1,\n", " u'shock wave': 1,\n", " u'steady state': 1,\n", " u'taxonomy': 1,\n", " u'transforming growth factor': 1,\n", " u'vitamin d': 1,\n", " u'zinc finger protein': 1},\n", " 2000: {u'alleles': 1,\n", " u'atmosphere': 1,\n", " u'cell cycle': 2,\n", " u'complex structure': 1,\n", " u'cosmological constant': 1,\n", " u'electron microscopy': 2,\n", " u'evolution': 2,\n", " u'gene expression': 3,\n", " u'genes': 3,\n", " u'genetics': 6,\n", " u'genome sequence': 2,\n", " u'high resolution': 2,\n", " u'messenger rna': 5,\n", " u'microbiology': 1,\n", " u'molecular genetics': 5,\n", " u'nanowires': 2,\n", " u'sexual reproduction': 2,\n", " u'signal transduction': 3,\n", " u'synapses': 1,\n", " u'transgenic plants': 2},\n", " 2001: {u'amino acid': 2,\n", " u'chemical composition': 1,\n", " u'ecosystem service': 2,\n", " u'environmental impact': 2,\n", " u'escherichia coli': 2,\n", " u'estuary': 1,\n", " u'fishing': 1,\n", " u'genetic code': 2,\n", " u'genetics': 2,\n", " u'infrared': 1,\n", " u'laser spectroscopy': 1,\n", " u'marine ecosystem': 2,\n", " u'messenger rna': 1,\n", " u'near earth asteroid': 1,\n", " u'polymorphism': 2,\n", " u'room temperature': 2,\n", " u'self assembly': 2,\n", " u'single electron transistor': 1,\n", " u'social capital': 1,\n", " u'spectrum': 2},\n", " 2002: {u'alternative splicing': 1,\n", " u'antigen presenting cell': 1,\n", " u'cell fate': 1,\n", " u'chemical synthesis': 1,\n", " u'climate warming': 1,\n", " u'computational mechanics': 1,\n", " u'copper': 1,\n", " u'distributed memory': 1,\n", " u'evolutionary biology': 1,\n", " u'gene expression': 2,\n", " u'genetic variation': 1,\n", " u'gravity anomaly': 1,\n", " u'messenger rna': 2,\n", " u'network architecture': 1,\n", " u'neural stem cell': 1,\n", " u'nitrogen': 1,\n", " u'power law': 1,\n", " u'social influence': 1,\n", " u'subduction': 1,\n", " u't cell receptor': 2},\n", " 2003: {u'alleles': 2,\n", " u'chromosomal rearrangement': 1,\n", " u'coral reef': 3,\n", " u'ecosystems': 2,\n", " u'gene expression': 3,\n", " u'genetics': 4,\n", " u'linguistics': 1,\n", " u'marine ecosystem': 2,\n", " u'messenger rna': 1,\n", " u'mitogen activated protein kinase': 1,\n", " u'molecular mechanics': 1,\n", " u'nitrogen': 2,\n", " u'oxygen': 2,\n", " u'receptors': 1,\n", " u'reefs': 1,\n", " u'regulon': 1,\n", " u'sea surface temperature': 2,\n", " u'selection': 1,\n", " u'social capital': 1,\n", " u'steady state': 1},\n", " 2004: {u'carbon monoxide': 1,\n", " u'complex fluid': 1,\n", " u'endosomes': 1,\n", " u'enzyme': 2,\n", " u'explicit memory': 1,\n", " u'genetics': 3,\n", " u'heat treatment': 1,\n", " u'lipolysis': 1,\n", " u'messenger rna': 1,\n", " u'mitogen activated protein kinase': 1,\n", " u'nitrogen': 1,\n", " u'physical properties': 2,\n", " u'protein phosphatase': 1,\n", " u'risk analysis': 1,\n", " u'rna interference': 1,\n", " u'sign language': 1,\n", " u'signaling pathway': 1,\n", " u'spectrum': 2,\n", " u'thermodynamics': 1,\n", " u'top down': 1},\n", " 2005: {u'agricultural production': 1,\n", " u'ancient dna': 1,\n", " u'antigenic variation': 1,\n", " u'carbon sequestration': 1,\n", " u'climate change': 2,\n", " u'climate model': 2,\n", " u'cumulant': 1,\n", " u'evapotranspiration': 1,\n", " u'financial market': 1,\n", " u'gene expression': 2,\n", " u'genome sequence': 1,\n", " u'gtp binding proteins': 1,\n", " u'ion channel': 1,\n", " u'lower bound': 1,\n", " u'natural gas': 2,\n", " u'potassium channel': 1,\n", " u'septins': 1,\n", " u'soft tissue': 1,\n", " u'spindle apparatus': 1,\n", " u'x chromosome': 1},\n", " 2006: {u'amino acid': 3,\n", " u'bulk density': 2,\n", " u'cell line': 2,\n", " u'dna damage': 2,\n", " u'dna sequence': 2,\n", " u'escherichia coli': 2,\n", " u'g protein': 2,\n", " u'life span': 2,\n", " u'milky way': 2,\n", " u'near earth asteroid': 2,\n", " u'near infrared': 2,\n", " u'outer membrane': 2,\n", " u'polymorphism': 2,\n", " u'positive selection': 2,\n", " u'power generation': 1,\n", " u'signal transduction': 3,\n", " u'social science': 1,\n", " u'spatial resolution': 2,\n", " u'surface area': 1,\n", " u'surface topography': 2},\n", " 2007: {u'amino acid sequence': 9,\n", " u'base pair': 8,\n", " u'cell line': 12,\n", " u'crystal structure': 18,\n", " u'dna replication': 9,\n", " u'enzyme': 19,\n", " u'escherichia coli': 8,\n", " u'gene expression': 24,\n", " u'genetics': 23,\n", " u'high resolution': 12,\n", " u'immune response': 9,\n", " u'iron': 10,\n", " u'membrane protein': 10,\n", " u'messenger rna': 9,\n", " u'mutation': 12,\n", " u'oscillations': 11,\n", " u'signal transduction': 9,\n", " u'signaling pathway': 12,\n", " u'three dimensional': 9,\n", " u'transcription factor': 12},\n", " 2008: {u'cell line': 29,\n", " u'cell proliferation': 14,\n", " u'climate change': 22,\n", " u'crystal structure': 17,\n", " u'enzyme': 28,\n", " u'escherichia coli': 14,\n", " u'gene expression': 30,\n", " u'genetics': 62,\n", " u'high resolution': 14,\n", " u'iron': 15,\n", " u'messenger rna': 14,\n", " u'mutation': 26,\n", " u'oscillations': 16,\n", " u'phosphorylation': 15,\n", " u'protein conformation': 17,\n", " u'rna interference': 22,\n", " u'signal transduction': 34,\n", " u'three dimensional': 13,\n", " u'transcription factor': 22,\n", " u'transcription factors': 20},\n", " 2009: {u'amino acid': 19,\n", " u'amino acid sequence': 22,\n", " u'cell line': 30,\n", " u'climate change': 36,\n", " u'crystal structure': 20,\n", " u'dna': 18,\n", " u'enzyme': 26,\n", " u'gene expression': 31,\n", " u'genes': 36,\n", " u'genetics': 66,\n", " u'kinetics': 20,\n", " u'magnetic field': 18,\n", " u'mutation': 27,\n", " u'oscillations': 19,\n", " u'protein binding': 18,\n", " u'protein conformation': 25,\n", " u'rna interference': 21,\n", " u'signal transduction': 51,\n", " u'signaling pathway': 18,\n", " u'transcription factor': 22},\n", " 2010: {u'amino acid sequence': 17,\n", " u'binding sites': 15,\n", " u'carbon dioxide': 23,\n", " u'cell line': 32,\n", " u'climate change': 18,\n", " u'crystal structure': 22,\n", " u'enzyme': 34,\n", " u'escherichia coli': 16,\n", " u'gene expression regulation': 15,\n", " u'genetics': 49,\n", " u'histones': 18,\n", " u'iron': 18,\n", " u'kinetics': 17,\n", " u'magnetic field': 15,\n", " u'mutation': 22,\n", " u'protein binding': 19,\n", " u'protein conformation': 23,\n", " u'signal transduction': 31,\n", " u'transcription factor': 22,\n", " u'transcription factors': 17},\n", " 2011: {u'amino acid sequence': 26,\n", " u'binding sites': 15,\n", " u'cell line': 23,\n", " u'climate change': 16,\n", " u'crystal structure': 22,\n", " u'enzyme': 15,\n", " u'escherichia coli': 15,\n", " u'gene expression': 19,\n", " u'genetics': 48,\n", " u'iron': 15,\n", " u'kinetics': 15,\n", " u'ligands': 12,\n", " u'mutation': 33,\n", " u'oscillations': 17,\n", " u'phosphorylation': 17,\n", " u'protein binding': 17,\n", " u'protein conformation': 15,\n", " u'signal transduction': 26,\n", " u'three dimensional': 14,\n", " u'transcription factor': 14},\n", " 2012: {u'amino acid sequence': 31,\n", " u'binding sites': 15,\n", " u'cell line': 13,\n", " u'crystal structure': 15,\n", " u'dna': 9,\n", " u'dna binding proteins': 9,\n", " u'escherichia coli': 17,\n", " u'gene expression regulation': 11,\n", " u'genetic variation': 10,\n", " u'hek293 cells': 9,\n", " u'hydrogen bonding': 9,\n", " u'mutagenesis': 9,\n", " u'mutation': 33,\n", " u'phenotype': 11,\n", " u'phosphorylation': 10,\n", " u'protein binding': 16,\n", " u'protein conformation': 25,\n", " u'rna interference': 10,\n", " u'signal transduction': 15,\n", " u'transcription factors': 11},\n", " 2013: {u'amino acid sequence': 23,\n", " u'binding sites': 11,\n", " u'cell differentiation': 9,\n", " u'dna': 11,\n", " u'dna binding proteins': 8,\n", " u'ergonomics': 9,\n", " u'escherichia coli': 12,\n", " u'gene expression regulation': 18,\n", " u'hek293 cells': 16,\n", " u'histones': 8,\n", " u'human factors': 9,\n", " u'injury prevention': 9,\n", " u'mutation': 19,\n", " u'natural sciences': 10,\n", " u'occupational safety': 9,\n", " u'protein conformation': 14,\n", " u'rna interference': 11,\n", " u'signal transduction': 17,\n", " u'suicide prevention': 9,\n", " u'transcription factors': 16},\n", " 2014: {u'alleles': 4,\n", " u'amino acid sequence': 4,\n", " u'biological sciences': 5,\n", " u'cell line': 6,\n", " u'cell proliferation': 4,\n", " u'chemistry': 4,\n", " u'climate change': 4,\n", " u'dna replication': 5,\n", " u'ergonomics': 4,\n", " u'evolutionary biology': 5,\n", " u'genetic variation': 5,\n", " u'hek293 cells': 4,\n", " u'injury prevention': 4,\n", " u'mutation': 8,\n", " u'natural sciences': 5,\n", " u'physical sciences': 4,\n", " u'protein conformation': 4,\n", " u'suicide prevention': 4,\n", " u'transcription factors': 4,\n", " u'transcriptome': 4},\n", " 2015: {u'atmosphere': 1,\n", " u'biological sciences': 2,\n", " u'chemical': 2,\n", " u'chemical engineering': 2,\n", " u'chemistry': 2,\n", " u'classification': 1,\n", " u'database': 2,\n", " u'galaxy': 1,\n", " u'material': 2,\n", " u'medical genetics': 2,\n", " u'membrane protein': 3,\n", " u'multidisciplinary': 1,\n", " u'ozone layer': 1,\n", " u'phylogeny': 2,\n", " u'physical sciences': 7,\n", " u'preprint': 1,\n", " u'protein interactions': 1,\n", " u'quantum electrodynamics': 1,\n", " u'ribosome': 2,\n", " u'theta rhythm': 1},\n", " 2016: {}}}},\n", " 'id': None,\n", " 'issn': (),\n", " 'name': 'Science',\n", " 'papers_type': 'MAG',\n", " 'start_year': 1918,\n", " 'type': 'journal'}" ] }, "execution_count": 28, "metadata": {}, "output_type": "execute_result" } ], "source": [ "v.features_dict" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "# 6. The Field of Study Class" ] }, { "attachments": {}, "cell_type": "markdown", "metadata": {}, "source": [ "The FieldOfStudy class is an extension of the Papers Collection class, and it supports all the Papers Collection class functionality. Moreover, the main goal of this class is to easily analyze the fields of study features over time to help understand how various field's features change over time. The class can be constructed using MAG's field of study ID. For example, if we want to analyze the \"social network\" field, we can use the following line." ] }, { "cell_type": "code", "execution_count": 29, "metadata": {}, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ "{'06D662E0': 'Social network analysis', '05242AA7': 'Social network'}\n" ] } ], "source": [ "# We us FieldsOfStudyFetcher (fetchers.fields_of_study,py) to get the field_id of social networks fields\n", "import re\n", "d = FIELDS_OF_STUDY_FETCHER.get_field_ids_by_name(re.compile(\".*social.*network.*\", re.IGNORECASE))\n", "print d" ] }, { "attachments": {}, "cell_type": "markdown", "metadata": {}, "source": [ "If we have two fields that contain the words \"social network,\" we will choose to analyze the field “social network analysis” with field ID of 06D662E0. We can use the PapersCollection function to calculate various field of study features. For example, we can find the most-cited articles after five years that are published in the field in each year." ] }, { "cell_type": "code", "execution_count": 31, "metadata": {}, "outputs": [ { "data": { "text/html": [ "
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citation_numberidstitlevenue_namevenue_typeyear
9.0740909C8Understanding the policy
landscape for climate ...		2015
36.05952A950What's different about
social media networks? a ...		Management Information
Systems Quarterly ...		journal2014
68.0816DE0D4Value network analysis
and value conversion of ...		Journal of Intellectual
Capital ...		journal2013
176.0803E5C6DA Review of Facebook
Research in the Social ...		Perspectives on
Psychological Science ...		journal2012
83.07A42E9EEA realist evaluation of
the role of communities ...		Implementation Sciencejournal2011
165.07F4AA6EAA matrix factorization
technique with trust ...		conference on recommender
systems ...		2010
494.075F0BB33Network Analysis in the
Social Sciences ...		Sciencejournal2009
267.07DC68258Dynamic Spread of
Happiness in a Large ...		BMJjournal2008
465.079FFC3D5Why we twitter:
understanding ...		knowledge discovery and
data mining ...		2007
90.07ECDA02DA Graph-theoretic
perspective on centra ...		Social Networksjournal2006
\n", "[38 rows x 6 columns]
Note: Only the head of the SFrame is printed.
You can use print_rows(num_rows=m, num_columns=n) to print more rows and columns.\n", "
" ], "text/plain": [ "Columns:\n", "\tcitation_number\tfloat\n", "\tids\tstr\n", "\ttitle\tstr\n", "\tvenue_name\tstr\n", "\tvenue_type\tstr\n", "\tyear\tint\n", "\n", "Rows: 38\n", "\n", "Data:\n", "+-----------------+----------+-------------------------------+\n", "| citation_number | ids | title |\n", "+-----------------+----------+-------------------------------+\n", "| 9.0 | 740909C8 | Understanding the policy l... |\n", "| 36.0 | 5952A950 | What's different about soc... |\n", "| 68.0 | 816DE0D4 | Value network analysis and... |\n", "| 176.0 | 803E5C6D | A Review of Facebook Resea... |\n", "| 83.0 | 7A42E9EE | A realist evaluation of th... |\n", "| 165.0 | 7F4AA6EA | A matrix factorization tec... |\n", "| 494.0 | 75F0BB33 | Network Analysis in the So... |\n", "| 267.0 | 7DC68258 | Dynamic Spread of Happines... |\n", "| 465.0 | 79FFC3D5 | Why we twitter: understand... |\n", "| 90.0 | 7ECDA02D | A Graph-theoretic perspect... |\n", "+-----------------+----------+-------------------------------+\n", "+-------------------------------+------------+------+\n", "| venue_name | venue_type | year |\n", "+-------------------------------+------------+------+\n", "| | | 2015 |\n", "| Management Information Sys... | journal | 2014 |\n", "| Journal of Intellectual Ca... | journal | 2013 |\n", "| Perspectives on Psychologi... | journal | 2012 |\n", "| Implementation Science | journal | 2011 |\n", "| conference on recommender ... | | 2010 |\n", "| Science | journal | 2009 |\n", "| BMJ | journal | 2008 |\n", "| knowledge discovery and da... | | 2007 |\n", "| Social Networks | journal | 2006 |\n", "+-------------------------------+------------+------+\n", "[38 rows x 6 columns]\n", "Note: Only the head of the SFrame is printed.\n", "You can use print_rows(num_rows=m, num_columns=n) to print more rows and columns." ] }, "execution_count": 31, "metadata": {}, "output_type": "execute_result" } ], "source": [ "from field_of_study import *\n", "fs = FieldOfStudy(field_id='06D662E0')\n", "fs.get_yearly_most_cited_papers_sframe(citation_after_year=5, max_publish_year=2015)" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "If we select only papers with at least five references, we can calculate various field of study features using the features_dict\n", "function:" ] }, { "cell_type": "code", "execution_count": 33, "metadata": {}, "outputs": [ { "data": { "text/plain": [ "{'end_year': 2016,\n", " 'features': {'authors_average_age': {'authors_average_age': {1975: 1.3333333333333333,\n", " 1979: 1.0,\n", " 1981: 2.6,\n", " 1982: 0.0,\n", " 1984: 3.0,\n", " 1985: 6.5,\n", " 1988: 0.0,\n", " 1989: 0.0,\n", " 1990: 3.0,\n", " 1991: 3.4,\n", " 1992: 0.0,\n", " 1993: 2.5,\n", " 1995: 8.384615384615385,\n", " 1996: 8.5,\n", " 1997: 4.0,\n", " 1998: 5.0,\n", " 1999: 5.956521739130435,\n", " 2000: 4.476190476190476,\n", " 2001: 3.8181818181818183,\n", " 2002: 6.155555555555556,\n", " 2003: 6.407766990291262,\n", " 2004: 5.17,\n", " 2005: 5.497607655502392,\n", " 2006: 6.339449541284404,\n", " 2007: 6.807272727272728,\n", " 2008: 6.848484848484849,\n", " 2009: 7.265326633165829,\n", " 2010: 7.140204271123491,\n", " 2011: 7.368378158109209,\n", " 2012: 7.353016688061618,\n", " 2013: 7.092161016949152,\n", " 2014: 6.979591836734694,\n", " 2015: 7.326855123674911,\n", " 2016: 6.296296296296297}},\n", " 'authors_median_age': {'authors_median_age': {1975: 2.0,\n", " 1979: 1.0,\n", " 1981: 3.0,\n", " 1982: 0.0,\n", " 1984: 3.0,\n", " 1985: 6.5,\n", " 1988: 0.0,\n", " 1989: 0.0,\n", " 1990: 3.0,\n", " 1991: 0.0,\n", " 1992: 0.0,\n", " 1993: 2.5,\n", " 1995: 6.0,\n", " 1996: 8.0,\n", " 1997: 4.0,\n", " 1998: 4.0,\n", " 1999: 2.0,\n", " 2000: 1.0,\n", " 2001: 0.0,\n", " 2002: 3.0,\n", " 2003: 5.0,\n", " 2004: 1.0,\n", " 2005: 3.0,\n", " 2006: 3.0,\n", " 2007: 4.0,\n", " 2008: 4.0,\n", " 2009: 4.0,\n", " 2010: 5.0,\n", " 2011: 5.0,\n", " 2012: 5.0,\n", " 2013: 4.0,\n", " 2014: 4.0,\n", " 2015: 5.0,\n", " 2016: 4.0}},\n", " 'authors_number': {'authors_number': {1975: 3,\n", " 1976: 0,\n", " 1977: 0,\n", " 1978: 0,\n", " 1979: 2,\n", " 1980: 0,\n", " 1981: 5,\n", " 1982: 1,\n", " 1983: 0,\n", " 1984: 2,\n", " 1985: 2,\n", " 1986: 0,\n", " 1987: 0,\n", " 1988: 1,\n", " 1989: 3,\n", " 1990: 2,\n", " 1991: 5,\n", " 1992: 1,\n", " 1993: 4,\n", " 1994: 0,\n", " 1995: 13,\n", " 1996: 8,\n", " 1997: 2,\n", " 1998: 16,\n", " 1999: 23,\n", " 2000: 21,\n", " 2001: 22,\n", " 2002: 45,\n", " 2003: 103,\n", " 2004: 100,\n", " 2005: 209,\n", " 2006: 327,\n", " 2007: 550,\n", " 2008: 726,\n", " 2009: 995,\n", " 2010: 1077,\n", " 2011: 1227,\n", " 2012: 779,\n", " 2013: 944,\n", " 2014: 735,\n", " 2015: 566,\n", " 2016: 54}},\n", " 'first_authors_average_age': {'first_authors_average_age': {1975: 0.0,\n", " 1979: 1.0,\n", " 1981: 1.5,\n", " 1982: 0.0,\n", " 1984: 3.0,\n", " 1985: 11.0,\n", " 1988: 0.0,\n", " 1989: 0.0,\n", " 1990: 0.0,\n", " 1991: 0.0,\n", " 1992: 0.0,\n", " 1993: 0.0,\n", " 1995: 1.5,\n", " 1996: 9.25,\n", " 1997: 4.0,\n", " 1998: 3.5714285714285716,\n", " 1999: 5.5,\n", " 2000: 3.8333333333333335,\n", " 2001: 2.7,\n", " 2002: 5.7272727272727275,\n", " 2003: 5.314285714285714,\n", " 2004: 4.804878048780488,\n", " 2005: 4.5064935064935066,\n", " 2006: 4.830508474576271,\n", " 2007: 4.831632653061225,\n", " 2008: 5.653696498054475,\n", " 2009: 5.566951566951567,\n", " 2010: 4.637362637362638,\n", " 2011: 5.87192118226601,\n", " 2012: 5.077205882352941,\n", " 2013: 5.222551928783383,\n", " 2014: 5.330645161290323,\n", " 2015: 5.611702127659575,\n", " 2016: 4.375}},\n", " 'first_authors_median_age': {'first_authors_median_age': {1975: 0.0,\n", " 1979: 1.0,\n", " 1981: 1.5,\n", " 1982: 0.0,\n", " 1984: 3.0,\n", " 1985: 11.0,\n", " 1988: 0.0,\n", " 1989: 0.0,\n", " 1990: 0.0,\n", " 1991: 0.0,\n", " 1992: 0.0,\n", " 1993: 0.0,\n", " 1995: 0.0,\n", " 1996: 10.0,\n", " 1997: 4.0,\n", " 1998: 0.0,\n", " 1999: 1.0,\n", " 2000: 0.0,\n", " 2001: 0.5,\n", " 2002: 3.0,\n", " 2003: 4.0,\n", " 2004: 1.0,\n", " 2005: 2.0,\n", " 2006: 2.0,\n", " 2007: 2.0,\n", " 2008: 3.0,\n", " 2009: 2.0,\n", " 2010: 3.0,\n", " 2011: 3.0,\n", " 2012: 3.0,\n", " 2013: 3.0,\n", " 2014: 3.0,\n", " 2015: 2.0,\n", " 2016: 3.0}},\n", " 'first_avg_female_probability': {'first_avg_female_probability': {1975: 0.2315939957112223,\n", " 1979: 0.006091324494421957,\n", " 1981: 0.004865971771387478,\n", " 1982: 0.003123769897038886,\n", " 1984: 0.0025822931117847614,\n", " 1985: 0.0042849878046021805,\n", " 1988: 0.9971830876768804,\n", " 1989: 0.9567253776634342,\n", " 1990: 0.0042849878046021805,\n", " 1991: 0.25037559877922233,\n", " 1992: 0.8109006314390163,\n", " 1993: 0.9943635973135663,\n", " 1995: 0.5013252994042431,\n", " 1996: 0.2528249872963295,\n", " 1997: 0.9974799891832975,\n", " 1998: 0.1751328912268471,\n", " 1999: 0.27902052372171254,\n", " 2000: 0.12796347435489303,\n", " 2001: 0.22722191135703948,\n", " 2002: 0.2560917141476772,\n", " 2003: 0.27004862236406424,\n", " 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7.663265306122449,\n", " 2008: 7.54863813229572,\n", " 2009: 8.78062678062678,\n", " 2010: 8.942307692307692,\n", " 2011: 8.817733990147783,\n", " 2012: 8.404411764705882,\n", " 2013: 8.474777448071217,\n", " 2014: 7.508064516129032,\n", " 2015: 8.861702127659575,\n", " 2016: 9.0625}},\n", " 'last_authors_median_age': {'last_authors_median_age': {1975: 2.0,\n", " 1979: 1.0,\n", " 1981: 1.5,\n", " 1982: 0.0,\n", " 1984: 3.0,\n", " 1985: 2.0,\n", " 1988: 0.0,\n", " 1989: 0.0,\n", " 1990: 6.0,\n", " 1991: 8.5,\n", " 1992: 0.0,\n", " 1993: 5.0,\n", " 1995: 6.0,\n", " 1996: 7.75,\n", " 1997: 4.0,\n", " 1998: 4.857142857142857,\n", " 1999: 7.8,\n", " 2000: 4.333333333333333,\n", " 2001: 3.2,\n", " 2002: 7.863636363636363,\n", " 2003: 8.885714285714286,\n", " 2004: 4.634146341463414,\n", " 2005: 6.714285714285714,\n", " 2006: 7.11864406779661,\n", " 2007: 7.663265306122449,\n", " 2008: 7.54863813229572,\n", " 2009: 8.78062678062678,\n", " 2010: 8.942307692307692,\n", " 2011: 8.817733990147783,\n", " 2012: 8.404411764705882,\n", " 2013: 8.474777448071217,\n", " 2014: 7.508064516129032,\n", " 2015: 8.861702127659575,\n", " 2016: 9.0625}},\n", " 'last_avg_female_probability': {'last_avg_female_probability': {1975: 0.0,\n", " 1979: 0.013075175793073823,\n", " 1981: 0.008563023223468857,\n", " 1982: 0.003123769897038886,\n", " 1984: 0.0025822931117847614,\n", " 1985: 0.0033321176166382083,\n", " 1988: 0.9971830876768804,\n", " 1989: 0.9892735987694167,\n", " 1990: 0.003123769897038886,\n", " 1991: 0.0020005266722049053,\n", " 1992: 0.8109006314390163,\n", " 1993: 0.004156661305636411,\n", " 1995: 0.7498302777782689,\n", " 1996: 0.5017107282571059,\n", " 1997: 0.9974799891832975,\n", " 1998: 0.14678159284541462,\n", " 1999: 0.49964802665028873,\n", " 2000: 0.2750485308010526,\n", " 2001: 0.3892342696573423,\n", " 2002: 0.42419547843568167,\n", " 2003: 0.2580134134416603,\n", " 2004: 0.3758080727684149,\n", " 2005: 0.30450020837645025,\n", " 2006: 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(10.96551724137931, 174),\n", " 2010: (12.674285714285714, 175),\n", " 2011: (10.75, 172),\n", " 2012: (11.914893617021276, 94),\n", " 2013: (13.042016806722689, 119),\n", " 2014: (11.323529411764707, 68),\n", " 2015: (13.166666666666666, 36),\n", " 2016: (11.0, 2)}},\n", " 'papers_number': {'papers_number': {1975: 1,\n", " 1976: 0,\n", " 1977: 0,\n", " 1978: 0,\n", " 1979: 1,\n", " 1980: 0,\n", " 1981: 2,\n", " 1982: 1,\n", " 1983: 0,\n", " 1984: 2,\n", " 1985: 1,\n", " 1986: 0,\n", " 1987: 0,\n", " 1988: 1,\n", " 1989: 1,\n", " 1990: 1,\n", " 1991: 2,\n", " 1992: 1,\n", " 1993: 1,\n", " 1994: 0,\n", " 1995: 4,\n", " 1996: 4,\n", " 1997: 2,\n", " 1998: 7,\n", " 1999: 10,\n", " 2000: 12,\n", " 2001: 10,\n", " 2002: 22,\n", " 2003: 35,\n", " 2004: 41,\n", " 2005: 77,\n", " 2006: 118,\n", " 2007: 196,\n", " 2008: 257,\n", " 2009: 351,\n", " 2010: 364,\n", " 2011: 406,\n", " 2012: 272,\n", " 2013: 337,\n", " 2014: 248,\n", " 2015: 188,\n", " 2016: 16}},\n", " 'top_keywords': {'top_keywords': {1975: {u'multidimensional scaling': 1,\n", " u'relational data': 1,\n", " u'social network analysis': 1},\n", " 1976: {},\n", " 1977: {},\n", " 1978: {},\n", " 1979: {u'interpersonal relations': 1,\n", " u'network analysis': 1,\n", " u'qualitative data': 1,\n", " u'social network analysis': 1,\n", " u'social structure': 1},\n", " 1980: {},\n", " 1981: {u'social network': 2,\n", " u'social network analysis': 2,\n", " u'social relation': 1},\n", " 1982: {u'social network analysis': 1},\n", " 1983: {},\n", " 1984: {u'interpersonal relations': 1,\n", " u'social network analysis': 2,\n", " u'social structure': 1},\n", " 1985: {u'social network analysis': 1},\n", " 1986: {},\n", " 1987: {},\n", " 1988: {u'social network analysis': 1},\n", " 1989: {u'social interaction': 1, u'social network analysis': 1},\n", " 1990: {u'group decision making': 1,\n", " u'social network analysis': 1,\n", " u'social structure': 1},\n", " 1991: {u'agonistic behavior': 1,\n", " u'dominance 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1},\n", " 2002: {u'association rule mining': 1,\n", " u'computer mediated communication': 2,\n", " u'computer network': 3,\n", " u'computer networks': 2,\n", " u'cost benefit analysis': 1,\n", " u'critical point': 1,\n", " u'data mining': 1,\n", " u'distance education': 2,\n", " u'distance learning': 1,\n", " u'e commerce': 2,\n", " u'intelligent network': 1,\n", " u'learning community': 1,\n", " u'multi agent system': 2,\n", " u'multi agent systems': 2,\n", " u'organisational structure': 2,\n", " u'social interaction': 2,\n", " u'social network': 8,\n", " u'social network analysis': 22,\n", " u'social networks': 2,\n", " u'social structure': 2},\n", " 2003: {u'centrality': 3,\n", " u'community development': 2,\n", " u'computer model': 2,\n", " u'content analysis': 2,\n", " u'data mining': 3,\n", " u'distance learning': 3,\n", " u'empirical study': 2,\n", " u'information technology': 2,\n", " u'information visualization': 3,\n", " u'knowledge management': 4,\n", " u'network analysis': 7,\n", " u'qualitative research': 2,\n", " u'questionnaire survey': 2,\n", " u'social capital': 2,\n", " u'social interaction': 3,\n", " u'social network': 9,\n", " u'social network analysis': 35,\n", " u'social networks': 4,\n", " u'social science': 3,\n", " u'wearable computer': 2},\n", " 2004: {u'clusters': 2,\n", " u'complex network': 1,\n", " u'directed graph': 2,\n", " u'field study': 1,\n", " u'graph theory': 2,\n", " u'information exchange': 3,\n", " u'knowledge systems': 2,\n", " u'network analysis': 3,\n", " u'production system': 2,\n", " u'relational data': 2,\n", " u'security': 2,\n", " u'social capital': 3,\n", " u'social network': 13,\n", " u'social network analysis': 41,\n", " u'social networks': 2,\n", " u'social sciences': 2,\n", " u'social structure': 2,\n", " u'social system': 2,\n", " u'terrorism': 2,\n", " u'text summarization': 1},\n", " 2005: {u'betweenness centrality': 3,\n", " u'complex network': 2,\n", " u'data collection': 4,\n", " u'data mining': 6,\n", " u'digital library': 3,\n", " u'graph theory': 3,\n", " u'internet': 4,\n", " u'knowledge management': 3,\n", " u'network analysis': 10,\n", " u'process mining': 2,\n", " u'semantic web': 3,\n", " u'social capital': 2,\n", " u'social interaction': 4,\n", " u'social network': 32,\n", " u'social network analysis': 77,\n", " u'social networks': 7,\n", " u'social science': 3,\n", " u'system design': 2,\n", " u'visualization': 4,\n", " u'web pages': 3},\n", " 2006: {u'collaborative learning': 4,\n", " u'complex network': 5,\n", " u'computer networks': 4,\n", " u'content analysis': 4,\n", " u'data collection': 5,\n", " u'data mining': 9,\n", " u'data visualisation': 5,\n", " u'graph theory': 7,\n", " u'information visualization': 4,\n", " u'network analysis': 17,\n", " u'network visualization': 5,\n", " u'networks': 5,\n", " u'relational data': 4,\n", " u'semantic web': 5,\n", " u'social network': 52,\n", " u'social network analysis': 118,\n", " u'social networks': 22,\n", " u'social relation': 5,\n", " u'social structure': 8,\n", " u'software development': 5},\n", " 2007: {u'betweenness centrality': 6,\n", " u'community structure': 4,\n", " u'computer mediated communication': 5,\n", " u'content analysis': 6,\n", " u'data mining': 18,\n", " u'graph theory': 14,\n", " u'information analysis': 5,\n", " u'information retrieval': 5,\n", " u'information technology': 5,\n", " u'internet': 6,\n", " u'knowledge management': 10,\n", " u'network analysis': 27,\n", " u'social interaction': 6,\n", " u'social media': 4,\n", " u'social network': 75,\n", " u'social network analysis': 196,\n", " u'social networks': 23,\n", " u'social relation': 5,\n", " u'social structure': 9,\n", " u'visualization': 5},\n", " 2008: {u'algorithm design and analysis': 10,\n", " u'clustering algorithms': 7,\n", " u'collaboration': 11,\n", " u'community structure': 9,\n", " u'complex network': 8,\n", " u'content analysis': 7,\n", " u'data mining': 27,\n", " u'graph theory': 14,\n", " u'internet': 11,\n", " u'knowledge management': 7,\n", " u'network analysis': 29,\n", " u'organizations': 7,\n", " u'social groups': 7,\n", " u'social interaction': 13,\n", " u'social network': 101,\n", " u'social network analysis': 257,\n", " u'social networks': 34,\n", " u'text mining': 8,\n", " u'visualization': 9,\n", " u'web mining': 6},\n", " 2009: {u'collaboration': 16,\n", " u'community structure': 11,\n", " u'complex network': 11,\n", " u'computer networks': 14,\n", " u'computer science': 12,\n", " u'data analysis': 24,\n", " u'data collection': 11,\n", " u'data mining': 92,\n", " u'databases': 11,\n", " u'graph theory': 18,\n", " u'information analysis': 17,\n", " u'internet': 22,\n", " u'network analysis': 41,\n", " u'probability density function': 12,\n", " u'social interaction': 18,\n", " u'social network': 159,\n", " u'social network analysis': 351,\n", " u'social networks': 43,\n", " u'social structure': 16,\n", " u'text mining': 11},\n", " 2010: {u'betweenness centrality': 9,\n", " u'clustering': 7,\n", " u'collaboration': 10,\n", " u'content analysis': 14,\n", " u'data collection': 7,\n", " u'data mining': 16,\n", " u'feature extraction': 7,\n", " u'graph theory': 10,\n", " u'information retrieval': 13,\n", " u'internet': 14,\n", " u'network analysis': 42,\n", " u'organizations': 9,\n", " u'recommender system': 8,\n", " u'social capital': 9,\n", " u'social interaction': 13,\n", " u'social network': 140,\n", " u'social network analysis': 364,\n", " u'social networks': 37,\n", " u'social structure': 7,\n", " u'statistical analysis': 9},\n", " 2011: {u'algorithm design and analysis': 10,\n", " u'collaboration': 19,\n", " u'computer model': 9,\n", " u'correlation': 10,\n", " u'data collection': 10,\n", " u'data mining': 36,\n", " u'graph theory': 16,\n", " u'indexation': 11,\n", " u'internet': 20,\n", " u'knowledge management': 9,\n", " u'network analysis': 31,\n", " u'organizations': 9,\n", " u'relational data': 9,\n", " u'semantic web': 10,\n", " u'social 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" u'knowledge management': 15,\n", " u'network analysis': 19,\n", " u'networking': 8,\n", " u'networks': 7,\n", " u'organizations': 7,\n", " u'social capital': 12,\n", " u'social media': 16,\n", " u'social network': 34,\n", " u'social network analysis': 337,\n", " u'social networking': 6,\n", " u'social networks': 43,\n", " u'trust': 6},\n", " 2014: {u'bibliometrics': 4,\n", " u'big data': 4,\n", " u'centrality': 7,\n", " u'china': 3,\n", " u'citation analysis': 4,\n", " u'collaboration': 8,\n", " u'communication': 5,\n", " u'content analysis': 4,\n", " u'data mining': 9,\n", " u'evaluation': 4,\n", " u'governance': 3,\n", " u'machine learning': 3,\n", " u'measurement': 3,\n", " u'network': 3,\n", " u'networks': 4,\n", " u'social capital': 5,\n", " u'social media': 13,\n", " u'social network': 4,\n", " u'social network analysis': 248,\n", " u'social networks': 5},\n", " 2015: {u'bibliometrics': 4,\n", " u'collaboration': 5,\n", " u'communication': 3,\n", " u'complex networks': 3,\n", " u'data mining': 8,\n", " u'governance': 3,\n", " u'kenya': 3,\n", " u'mathematical model': 3,\n", " u'mixed methods': 3,\n", " u'mixed methods research': 2,\n", " u'ranking': 2,\n", " u'sentiment analysis': 2,\n", " u'shortest path': 2,\n", " u'social capital': 6,\n", " u'social influence': 2,\n", " u'social media': 7,\n", " u'social network analysis': 188,\n", " u'social networks': 4,\n", " u'teamwork': 3,\n", " u'visualization': 2},\n", " 2016: {u'betweenness centrality': 1,\n", " u'bibliometrics': 1,\n", " u'bioinformatics': 1,\n", " u'common pool resources': 1,\n", " u'content analysis': 1,\n", " u'fisheries': 1,\n", " u'genetic algorithm': 1,\n", " u'information flow': 1,\n", " u'landscape planning': 1,\n", " u'logistic model': 1,\n", " u'marine protected area': 1,\n", " u'path analysis': 1,\n", " u'risk management': 1,\n", " u'social capital': 1,\n", " u'social cognitive theory': 1,\n", " u'social media': 1,\n", " u'social network analysis': 16,\n", " u'social network theory': 2,\n", " u'systems theory': 1,\n", " u'topsis': 1}}}},\n", " 'field_id': '06D662E0',\n", " 'level': 3,\n", " 'max_cited_paper': {'citation_number': 1213.0,\n", " 'title': u'Maximizing the spread of influence through a social network',\n", " 'venue_name': u'knowledge discovery and data mining',\n", " 'venue_tyoe': 'None',\n", " 'year': 2003},\n", " 'name': 'Social network analysis',\n", " 'papers_number': 2992,\n", " 'start_year': 1975}" ] }, "execution_count": 33, "metadata": {}, "output_type": "execute_result" } ], "source": [ "fs = FieldOfStudy(field_id='06D662E0', papers_filter_func=lambda p: p.references_count < 5) # to calculate authors features only papers with at least five references need to be selected\n", "fs.features_dict(add_field_features_over_time=True)" ] } ], "metadata": { "kernelspec": { "display_name": "Python 2", "language": "python", "name": "python2" }, "language_info": { "codemirror_mode": { "name": "ipython", "version": 2 }, "file_extension": ".py", "mimetype": "text/x-python", "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython2", "version": "2.7.14" } }, "nbformat": 4, "nbformat_minor": 2 }